RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SETQ01105 290 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-208ENST00000543633 ARID5AQ03989 594 aa14.98□□□□□ -0.01
VPS33A-208ENST00000543633 DDR1Q08345 913 aa14.98□□□□□ -0.01
VPS33A-208ENST00000543633 UAP1Q16222 522 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-208ENST00000543633 SKIDA1Q1XH10 827 aa14.98□□□□□ -0.01
VPS33A-208ENST00000543633 CRY2Q49AN0 593 aa14.98□□□□□ -0.01
VPS33A-208ENST00000543633 ARSHQ5FYA8 562 aa14.98□□□□□ -0.01
VPS33A-208ENST00000543633 C6orf89Q6UWU4 347 aa14.98□□□□□ -0.01
VPS33A-208ENST00000543633 COL23A1Q86Y22 540 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-208ENST00000543633 CCDC24Q8N4L8 307 aa14.98□□□□□ -0.01
VPS33A-208ENST00000543633 SYT2Q8N9I0 419 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-208ENST00000543633 P3H4Q92791 437 aa14.98□□□□□ -0.01
VPS33A-208ENST00000543633 TBC1D7Q9P0N9 293 aa14.98□□□□□ -0.01
VPS33A-208ENST00000543633 RPA1P27694 616 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 EIF3BP55884 814 aaKnown RBP14.97□□□□□ -0.01
VPS33A-208ENST00000543633 ZNF844Q08AG5 666 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 KCNV1Q6PIU1 500 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 TAX1BP1Q86VP1 789 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 METTL13Q8N6R0 699 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 RPGRQ92834 1020 aaKnown RBP14.97□□□□□ -0.01
VPS33A-208ENST00000543633 ANO3Q9BYT9 981 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 VCPKMTQ9H867 229 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 CAPN7Q9Y6W3 813 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 C5orf60A6NFR6 353 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 MED24O75448 989 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 CTNNA1P35221 906 aaKnown RBP14.97□□□□□ -0.01
VPS33A-208ENST00000543633 DNA2P51530 1060 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 GIT2Q14161 759 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 PEX26Q7Z412 305 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 ETNPPLQ8TBG4 499 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 CRYGNQ8WXF5 182 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 HES6Q96HZ4 224 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 SIX2Q9NPC8 291 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 SERPINB13Q9UIV8 391 aa14.97□□□□□ -0.01
VPS33A-208ENST00000543633 KRIT1O00522 736 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 SLC9A1P19634 815 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 CDR1P51861 262 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 ACTN3Q08043 901 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-208ENST00000543633 SPIRE1Q08AE8 756 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 Q4G0T1 1027 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 PRR5LQ6MZQ0 368 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 CCDC91Q7Z6B0 441 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 TEX2Q8IWB9 1127 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 DCAF4Q8WV16 495 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 CYFIP2Q96F07 1278 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 CCDC17Q96LX7 622 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 NAP1L3Q99457 506 aaPredicted RBP14.96□□□□□ -0.01
VPS33A-208ENST00000543633 RABEP2Q9H5N1 569 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 CNOT10Q9H9A5 744 aaKnown RBP14.96□□□□□ -0.01
VPS33A-208ENST00000543633 DNM3Q9UQ16 869 aa14.96□□□□□ -0.01
VPS33A-208ENST00000543633 NPHP3-ACAD11A0A0J9YXS1 232 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 GMNCA6NCL1 334 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 E7EVH7 732 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 H0YHG0 523 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 TULP1O00294 542 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 EIF3DO15371 548 aaKnown RBP eCLIP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 TRAPPC3O43617 180 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 GAP43P17677 238 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 SMTNP53814 917 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 PPP2R2AP63151 447 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 HDLBPQ00341 1268 aaKnown RBP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 EN1Q05925 392 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 TMC3Q7Z5M5 1100 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 NT5DC3Q86UY8 548 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 SFR1Q86XK3 245 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 RBM46Q8TBY0 533 aaKnown RBP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 FAM20AQ96MK3 541 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 TACO1Q9BSH4 297 aaKnown RBP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 RAB17Q9H0T7 212 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 GEMIN8Q9NWZ8 242 aaKnown RBP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 UBE4BO95155 1302 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 USP17L10C9JJH3 530 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 MYO1FO00160 1098 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 POLRMTO00411 1230 aaKnown RBP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 SERPINB2P05120 415 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 TMEM253P0C7T8 217 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 ACTN1P12814 892 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 LMNB1P20700 586 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 STAT1P42224 750 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 SLC15A2Q16348 729 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 FBXW10Q5XX13 1052 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 RPAINQ86UA6 219 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 RFFLQ8WZ73 363 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 SLC35C1Q96A29 364 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 RBM17Q96I25 401 aaKnown RBP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 GPR101Q96P66 508 aaPredicted RBP14.95□□□□□ -0.02
VPS33A-208ENST00000543633 MKNK1Q9BUB5 465 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 OLFML3Q9NRN5 406 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 ASTN1O14525 1302 aa14.95□□□□□ -0.02
VPS33A-208ENST00000543633 POTEFA5A3E0 1075 aa14.94□□□□□ -0.02
VPS33A-208ENST00000543633 BBOX1O75936 387 aa14.94□□□□□ -0.02
VPS33A-208ENST00000543633 FOSP01100 380 aaPredicted RBP14.94□□□□□ -0.02
VPS33A-208ENST00000543633 NR3C1P04150 777 aa14.94□□□□□ -0.02
VPS33A-208ENST00000543633 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
VPS33A-208ENST00000543633 SHMT1P34896 483 aa14.94□□□□□ -0.02
VPS33A-208ENST00000543633 CASP5P51878 434 aa14.94□□□□□ -0.02
VPS33A-208ENST00000543633 TRADDQ15628 312 aa14.94□□□□□ -0.02
VPS33A-208ENST00000543633 POTEGQ6S5H5 508 aa14.94□□□□□ -0.02
VPS33A-208ENST00000543633 POTEEQ6S8J3 1075 aa14.94□□□□□ -0.02
VPS33A-208ENST00000543633 CENPTQ96BT3 561 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms