RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 NAALADL2Q58DX5 795 aa25.76■■□□□ 1.71
HOMER3-205ENST00000542541 MAGEF1Q9HAY2 307 aa25.76■■□□□ 1.71
HOMER3-205ENST00000542541 CYP26B1Q9NR63 512 aa25.76■■□□□ 1.71
HOMER3-205ENST00000542541 COL1A2P08123 1366 aa25.76■■□□□ 1.71
HOMER3-205ENST00000542541 NRCAMQ92823 1304 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 ARHGEF35A5YM69 484 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 SLFN14P0C7P3 912 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 PLA2G4BP0C869 781 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 LIG1P18858 919 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 RARRES1P49788 294 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 PPFIA1Q13136 1202 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 SNW1Q13573 536 aaKnown RBP25.75■■□□□ 1.71
HOMER3-205ENST00000542541 NFRKBQ6P4R8 1299 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 SV2BQ7L1I2 683 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 EXOC8Q8IYI6 725 aa25.75■■□□□ 1.71
HOMER3-205ENST00000542541 SYT2Q8N9I0 419 aaPredicted RBP25.75■■□□□ 1.71
HOMER3-205ENST00000542541 MYH9P35579 1960 aaKnown RBP25.75■■□□□ 1.71
HOMER3-205ENST00000542541 MBD3O95983 291 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 SSBP05455 408 aaKnown RBP eCLIP25.74■■□□□ 1.71
HOMER3-205ENST00000542541 SMIM10L2AP0DMW4 78 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 SMIM10L2BP0DMW5 78 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 GNAT1P11488 350 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 ITGA7Q13683 1181 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 MTERF2Q49AM1 385 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 LRRC27Q9C0I9 530 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 A0A0U1RQG5 324 aaPredicted RBP25.74■■□□□ 1.71
HOMER3-205ENST00000542541 KINO60870 393 aaKnown RBP25.74■■□□□ 1.71
HOMER3-205ENST00000542541 NR1I2O75469 434 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 NPEPPSP55786 919 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 AMPD3Q01432 767 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 TARBP2Q15633 366 aaKnown RBP25.74■■□□□ 1.71
HOMER3-205ENST00000542541 LONRF3Q496Y0 759 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 PLA2G4FQ68DD2 849 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 KANK3Q6NY19 840 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 CNNM3Q8NE01 707 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 ABHD8Q96I13 439 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 TIGD1Q96MW7 591 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 SERTAD1Q9UHV2 236 aa25.74■■□□□ 1.71
HOMER3-205ENST00000542541 TMEM150BA6NC51 233 aa25.73■■□□□ 1.71
HOMER3-205ENST00000542541 PTPN11Q06124 597 aaPredicted RBP25.73■■□□□ 1.71
HOMER3-205ENST00000542541 MCM6Q14566 821 aa25.73■■□□□ 1.71
HOMER3-205ENST00000542541 GRIK4Q16099 956 aa25.73■■□□□ 1.71
HOMER3-205ENST00000542541 KRBA2Q6ZNG9 492 aa25.73■■□□□ 1.71
HOMER3-205ENST00000542541 SESTD1Q86VW0 696 aa25.73■■□□□ 1.71
HOMER3-205ENST00000542541 TNS4Q8IZW8 715 aa25.73■■□□□ 1.71
HOMER3-205ENST00000542541 SENP6Q9GZR1 1112 aaPredicted RBP25.73■■□□□ 1.71
HOMER3-205ENST00000542541 KCND2Q9NZV8 630 aa25.73■■□□□ 1.71
HOMER3-205ENST00000542541 HDAC6Q9UBN7 1215 aa25.73■■□□□ 1.71
HOMER3-205ENST00000542541 KIAA0100Q14667 2235 aaKnown RBP25.73■■□□□ 1.71
HOMER3-205ENST00000542541 ACTN4O43707 911 aaKnown RBP25.72■■□□□ 1.71
HOMER3-205ENST00000542541 RFC5P40937 340 aa25.72■■□□□ 1.71
HOMER3-205ENST00000542541 MNX1P50219 401 aaPredicted RBP25.72■■□□□ 1.71
HOMER3-205ENST00000542541 SLC12A3P55017 1021 aa25.72■■□□□ 1.71
HOMER3-205ENST00000542541 DHX8Q14562 1220 aaKnown RBP25.72■■□□□ 1.71
HOMER3-205ENST00000542541 FAM47CQ5HY64 1035 aa25.72■■□□□ 1.71
HOMER3-205ENST00000542541 PADI6Q6TGC4 694 aa25.72■■□□□ 1.71
HOMER3-205ENST00000542541 LRRC15Q8TF66 581 aa25.72■■□□□ 1.71
HOMER3-205ENST00000542541 JPH2Q9BR39 696 aaPredicted RBP25.72■■□□□ 1.71
HOMER3-205ENST00000542541 TNMDQ9H2S6 317 aa25.72■■□□□ 1.71
HOMER3-205ENST00000542541 BMP2KQ9NSY1 1161 aaPredicted RBP25.72■■□□□ 1.71
HOMER3-205ENST00000542541 SETD4Q9NVD3 440 aa25.72■■□□□ 1.71
HOMER3-205ENST00000542541 DACT1Q9NYF0 836 aa25.72■■□□□ 1.71
HOMER3-205ENST00000542541 C17orf102A2RUQ5 167 aa25.71■■□□□ 1.71
HOMER3-205ENST00000542541 MAGEB2O15479 319 aa25.71■■□□□ 1.71
HOMER3-205ENST00000542541 DGAT1O75907 488 aa25.71■■□□□ 1.71
HOMER3-205ENST00000542541 IGBP1P78318 339 aa25.71■■□□□ 1.71
HOMER3-205ENST00000542541 TBC1D8BQ0IIM8 1120 aa25.71■■□□□ 1.71
HOMER3-205ENST00000542541 SLC7A3Q8WY07 619 aa25.71■■□□□ 1.71
HOMER3-205ENST00000542541 SH2D3AQ9BRG2 576 aa25.71■■□□□ 1.71
HOMER3-205ENST00000542541 KBTBD4Q9NVX7 518 aa25.71■■□□□ 1.71
HOMER3-205ENST00000542541 GTF2IRD1Q9UHL9 959 aa25.71■■□□□ 1.71
HOMER3-205ENST00000542541 HOOK1Q9UJC3 728 aaKnown RBP25.71■■□□□ 1.71
HOMER3-205ENST00000542541 ZBTB42B2RXF5 422 aa25.7■■□□□ 1.71
HOMER3-205ENST00000542541 LMBR1Q8WVP7 490 aa25.7■■□□□ 1.71
HOMER3-205ENST00000542541 GRIN2DO15399 1336 aa25.7■■□□□ 1.7
HOMER3-205ENST00000542541 COL6A1P12109 1028 aa25.7■■□□□ 1.7
HOMER3-205ENST00000542541 POLGP54098 1239 aaPredicted RBP25.7■■□□□ 1.7
HOMER3-205ENST00000542541 NECAB2Q7Z6G3 386 aa25.7■■□□□ 1.7
HOMER3-205ENST00000542541 SLC43A3Q8NBI5 491 aa25.7■■□□□ 1.7
HOMER3-205ENST00000542541 RETREG2Q8NC44 543 aa25.7■■□□□ 1.7
HOMER3-205ENST00000542541 CEP89Q96ST8 783 aa25.7■■□□□ 1.7
HOMER3-205ENST00000542541 WDR81Q562E7 1941 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 SCN10AQ9Y5Y9 1956 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 ARVCFO00192 962 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 MAFO75444 373 aaPredicted RBP25.69■■□□□ 1.7
HOMER3-205ENST00000542541 KLRC1P26715 233 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 HOXC8P31273 242 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 NFKBIBQ15653 356 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 RINT1Q6NUQ1 792 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 GPBP1Q86WP2 473 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 GPT2Q8TD30 523 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 C11orf49Q9H6J7 331 aa25.69■■□□□ 1.7
HOMER3-205ENST00000542541 DHX33Q9H6R0 707 aaKnown RBP25.69■■□□□ 1.7
HOMER3-205ENST00000542541 GAS2O43903 313 aaKnown RBP25.68■■□□□ 1.7
HOMER3-205ENST00000542541 USO1O60763 962 aaKnown RBP25.68■■□□□ 1.7
HOMER3-205ENST00000542541 MYL1P05976 194 aa25.68■■□□□ 1.7
HOMER3-205ENST00000542541 CYP11B2P19099 503 aa25.68■■□□□ 1.7
HOMER3-205ENST00000542541 MTHFD1LQ6UB35 978 aa25.68■■□□□ 1.7
HOMER3-205ENST00000542541 ELOA2Q8IYF1 753 aaPredicted RBP25.68■■□□□ 1.7
HOMER3-205ENST00000542541 MCPH1Q8NEM0 835 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms