RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 JMYQ8N9B5 988 aa6.94□□□□□ -1.3
CIT-211ENST00000541841 SH3RF3Q8TEJ3 882 aaPredicted RBP6.94□□□□□ -1.3
CIT-211ENST00000541841 PMM1Q92871 262 aa6.94□□□□□ -1.3
CIT-211ENST00000541841 WWC2-AS2Q96NR7 200 aa6.94□□□□□ -1.3
CIT-211ENST00000541841 LRRC37BQ96QE4 947 aa6.94□□□□□ -1.3
CIT-211ENST00000541841 C1QTNF3Q9BXJ4 246 aa6.94□□□□□ -1.3
CIT-211ENST00000541841 SLC52A2Q9HAB3 445 aa6.94□□□□□ -1.3
CIT-211ENST00000541841 ARHGAP28Q9P2N2 729 aa6.94□□□□□ -1.3
CIT-211ENST00000541841 ATP23Q9Y6H3 246 aa6.94□□□□□ -1.3
CIT-211ENST00000541841 PRAMEF25A6NGN4 478 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 ZNF561-AS1K7EIQ3 104 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 WNT9AO14904 365 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 CNGA1P29973 690 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 RRADP55042 308 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 GABREP78334 506 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 ST5P78524 1137 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 NOLC1Q14978 699 aaKnown RBP eCLIP6.93□□□□□ -1.3
CIT-211ENST00000541841 SEC23AQ15436 765 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 TCEA2Q15560 299 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 ZC3H7AQ8IWR0 971 aaKnown RBP6.93□□□□□ -1.3
CIT-211ENST00000541841 MORC4Q8TE76 937 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 AJUBAQ96IF1 538 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 SMURF1Q9HCE7 757 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 MAGEC2Q9UBF1 373 aaPredicted RBP6.93□□□□□ -1.3
CIT-211ENST00000541841 COQ6Q9Y2Z9 468 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 EID1Q9Y6B2 187 aa6.93□□□□□ -1.3
CIT-211ENST00000541841 POU3F3P20264 500 aaPredicted RBP6.92□□□□□ -1.3
CIT-211ENST00000541841 ADCY8P40145 1251 aa6.92□□□□□ -1.3
CIT-211ENST00000541841 TM4SF20Q53R12 229 aa6.92□□□□□ -1.3
CIT-211ENST00000541841 BRDTQ58F21 947 aaPredicted RBP6.92□□□□□ -1.3
CIT-211ENST00000541841 SLFN13Q68D06 897 aa6.92□□□□□ -1.3
CIT-211ENST00000541841 C16orf59Q7L2K0 433 aa6.92□□□□□ -1.3
CIT-211ENST00000541841 DNERQ8NFT8 737 aa6.92□□□□□ -1.3
CIT-211ENST00000541841 KISS1RQ969F8 398 aaPredicted RBP6.92□□□□□ -1.3
CIT-211ENST00000541841 CEP89Q96ST8 783 aa6.92□□□□□ -1.3
CIT-211ENST00000541841 KLC2Q9H0B6 622 aa6.92□□□□□ -1.3
CIT-211ENST00000541841 DEF6Q9H4E7 631 aa6.92□□□□□ -1.3
CIT-211ENST00000541841 C4BPAP04003 597 aaKnown RBP6.91□□□□□ -1.3
CIT-211ENST00000541841 CHGBP05060 677 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 ZXDAP98168 799 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 FAM50AQ14320 339 aaKnown RBP6.91□□□□□ -1.3
CIT-211ENST00000541841 CRY1Q16526 586 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 FIGNQ5HY92 759 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 EP400NLQ6ZTU2 488 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 NLGN4XQ8N0W4 816 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 SLC7A14Q8TBB6 771 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 TSR2Q969E8 191 aaKnown RBP6.91□□□□□ -1.3
CIT-211ENST00000541841 KATNBL1Q9H079 304 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 ATP8A1Q9Y2Q0 1164 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 SLC4A7Q9Y6M7 1214 aa6.91□□□□□ -1.3
CIT-211ENST00000541841 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.9□□□□□ -1.3
CIT-211ENST00000541841 C1QTNF3-AMACRE9PGA6 284 aa6.9□□□□□ -1.3
CIT-211ENST00000541841 FOXS1O43638 330 aa6.9□□□□□ -1.3
CIT-211ENST00000541841 PRC1O43663 620 aa6.9□□□□□ -1.3
CIT-211ENST00000541841 IL13RA1P78552 427 aa6.9□□□□□ -1.3
CIT-211ENST00000541841 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
CIT-211ENST00000541841 THNSL2Q86YJ6 484 aa6.9□□□□□ -1.3
CIT-211ENST00000541841 Q8TCH9 128 aa6.9□□□□□ -1.3
CIT-211ENST00000541841 LMF1Q96S06 567 aa6.9□□□□□ -1.3
CIT-211ENST00000541841 PATE3B3GLJ2 98 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 SCDO00767 359 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 KCNQ2O43526 872 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 MMEP08473 750 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 MYCLP1P12525 358 aaPredicted RBP6.89□□□□□ -1.31
CIT-211ENST00000541841 PTGS1P23219 599 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 TOP3AQ13472 1001 aaPredicted RBP6.89□□□□□ -1.31
CIT-211ENST00000541841 USP10Q14694 798 aaKnown RBP6.89□□□□□ -1.31
CIT-211ENST00000541841 WDR72Q3MJ13 1102 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 TCTN3Q6NUS6 607 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 DDX42Q86XP3 938 aaKnown RBP eCLIP6.89□□□□□ -1.31
CIT-211ENST00000541841 IFNL2Q8IZJ0 200 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 UBR7Q8N806 425 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 SCLYQ96I15 445 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 UCKL1Q9NWZ5 548 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 BTBD7Q9P203 1132 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 CDC42EP3Q9UKI2 254 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 PLAAQ9Y263 795 aa6.89□□□□□ -1.31
CIT-211ENST00000541841 ZNF623O75123 536 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 AOAHP28039 575 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 POLD1P28340 1107 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 KCNQ1P51787 676 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 RHBDL3P58872 404 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 EXOSC10Q01780 885 aaKnown RBP6.88□□□□□ -1.31
CIT-211ENST00000541841 RNF151Q2KHN1 245 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 KRTAP5-3Q6L8H2 238 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 FGD2Q7Z6J4 655 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 TAX1BP1Q86VP1 789 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 WDR75Q8IWA0 830 aaKnown RBP6.88□□□□□ -1.31
CIT-211ENST00000541841 REXO1L1PQ8IX06 675 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 CHAC2Q8WUX2 184 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 CCDC136Q96JN2 1154 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 CARD11Q9BXL7 1154 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 KIAA1683Q9H0B3 1180 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 PRDM16Q9HAZ2 1276 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 INCENPQ9NQS7 918 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 TCEAL9Q9UHQ7 104 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 TSC22D4Q9Y3Q8 395 aa6.88□□□□□ -1.31
CIT-211ENST00000541841 AKAP8O43823 692 aaKnown RBP6.87□□□□□ -1.31
CIT-211ENST00000541841 MPIG6BO95866 241 aa6.87□□□□□ -1.31
CIT-211ENST00000541841 FSHBP01225 129 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms