RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 AMPD2Q01433 879 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 APBA1Q02410 837 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 CCL15Q16663 113 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 CCDC181Q5TID7 509 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 CACNA2D4Q7Z3S7 1137 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 OTUD6BQ8N6M0 293 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 CYP2W1Q8TAV3 490 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 COG1Q8WTW3 980 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 IFIH1Q9BYX4 1025 aaKnown RBP15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 NCK2O43639 380 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 GNAQP50148 359 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 SEC24CP53992 1094 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 E2F5Q15329 346 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 GIMAP8Q8ND71 665 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 CCPG1Q9ULG6 757 aa15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.72■□□□□ 0.11
SFSWAP-210ENST00000541286 PNMA6FA0A0J9YX94 578 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 SPDYE16A6NNV3 312 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 EPHB6O15197 1021 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 NSMFQ6X4W1 530 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 TRAPPC11Q7Z392 1133 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 MS4A4AQ96JQ5 239 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 WDR18Q9BV38 432 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 ASCC2Q9H1I8 757 aaPredicted RBP15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 MYO1AQ9UBC5 1043 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 PAPPA2Q9BXP8 1791 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 PTPRFP10586 1907 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 BTBD19C9JJ37 291 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 VWA5AO00534 786 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 KRT14P02533 472 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 RPSAP08865 295 aaKnown RBP15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 CCNE1P24864 410 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 USP14P54578 494 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 GUCY1A3Q02108 690 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 FSTL1Q12841 308 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 TUBB2AQ13885 445 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 FBXO11Q86XK2 927 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 CEP89Q96ST8 783 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 TUBB2BQ9BVA1 445 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 THAP9Q9H5L6 903 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 AS3MTQ9HBK9 375 aa15.71■□□□□ 0.11
SFSWAP-210ENST00000541286 DOCK3Q8IZD9 2030 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 RHOBTB3O94955 611 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 GLIS3Q8NEA6 775 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 ZNF507Q8TCN5 953 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 C6orf50Q9HD87 102 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 KBTBD4Q9NVX7 518 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 PKD2L1Q9P0L9 805 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 COL20A1Q9P218 1284 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 IGF2BP3O00425 579 aaKnown RBP eCLIP15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 GSCP56915 257 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 SETQ01105 290 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 NOL9Q5SY16 702 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 SNRNP48Q6IEG0 339 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 GPAT2Q6NUI2 795 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 NEK8Q86SG6 692 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 NELFCDQ8IXH7 590 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 N4BP2L2Q92802 583 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 DNAJC7Q99615 494 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 CAPN6Q9Y6Q1 641 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 BICDL2A1A5D9 508 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 CLGNO14967 610 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 EDIL3O43854 480 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 EIF4A3P38919 411 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 NFRKBQ6P4R8 1299 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 TSKSQ9UJT2 592 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 PPP1R9AQ9ULJ8 1098 aa15.7■□□□□ 0.1
SFSWAP-210ENST00000541286 COL11A1P12107 1806 aaPredicted RBP15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 PASKQ96RG2 1323 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 WDR46O15213 610 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 USO1O60763 962 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 NEBLO76041 1014 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 KIAA0754O94854 1291 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 PAX7P23759 505 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 ZBED6P86452 979 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 PPATQ06203 517 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 CCDC70Q6NSX1 233 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 CATSPERGQ6ZRH7 1159 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 SV2BQ7L1I2 683 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 PRPF38AQ8NAV1 312 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 SCLT1Q96NL6 688 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 PSTPIP2Q9H939 334 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 DMGDHQ9UI17 866 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 TDP2O95551 362 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 SPRYD7Q5W111 196 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 TRMT1LQ7Z2T5 733 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 RPAINQ86UA6 219 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 REXO1Q8N1G1 1221 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 DONSONQ9NYP3 566 aa15.69■□□□□ 0.1
SFSWAP-210ENST00000541286 A0A0G2JLL6 359 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 PGK2P07205 417 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 RDXP35241 583 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 AMPD3Q01432 767 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 PRRT2Q7Z6L0 340 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 FAM114A1Q8IWE2 563 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 DHTKD1Q96HY7 919 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 PORCNQ9H237 461 aa15.68■□□□□ 0.1
SFSWAP-210ENST00000541286 SH2D4AQ9H788 454 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms