RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 MINPP1Q9UNW1 487 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 PCDHA13Q9Y5I0 950 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 PDE1CQ14123 709 aaPredicted RBP18.06■□□□□ 0.48
SCARB1-205ENST00000538291 TMEM35BQ8NCS4 154 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 PDE11AQ9HCR9 933 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 EXOC1LA0A1B0GW35 172 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 PAMP19021 973 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 SH3BGRP55822 239 aaPredicted RBP18.06■□□□□ 0.48
SCARB1-205ENST00000538291 TRIP13Q15645 432 aaPredicted RBP18.06■□□□□ 0.48
SCARB1-205ENST00000538291 ZNF568Q3ZCX4 644 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 CDC26Q8NHZ8 85 aa18.06■□□□□ 0.48
SCARB1-205ENST00000538291 PHEXP78562 749 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 ALKBH5Q6P6C2 394 aaKnown RBP18.05■□□□□ 0.48
SCARB1-205ENST00000538291 LRRC31Q6UY01 552 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 TRIM67Q6ZTA4 783 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 SCYL3Q8IZE3 742 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 TMEM47Q9BQJ4 181 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 MXD3Q9BW11 206 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 RNF181Q9P0P0 153 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 KDM5CP41229 1560 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 UNC13DQ70J99 1090 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 CENPUQ71F23 418 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 AFF2P51816 1311 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 SPATA31A3Q5VYP0 1347 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 SPECC1L-ADORA2AF8WAN1 911 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 PRDX5P30044 214 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 ZKSCAN8Q15776 578 aaPredicted RBP18.05■□□□□ 0.48
SCARB1-205ENST00000538291 PPP6R3Q5H9R7 873 aaPredicted RBP18.05■□□□□ 0.48
SCARB1-205ENST00000538291 SLC27A3Q5K4L6 730 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 RSBN1LQ6PCB5 846 aaPredicted RBP18.05■□□□□ 0.48
SCARB1-205ENST00000538291 PADI6Q6TGC4 694 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 SYNE4Q8N205 404 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 ZNF500O60304 480 aaPredicted RBP18.05■□□□□ 0.48
SCARB1-205ENST00000538291 CUL4AQ13619 759 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 PPP1R18Q6NYC8 613 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 ACRBPQ8NEB7 543 aa18.05■□□□□ 0.48
SCARB1-205ENST00000538291 CYP2D6P10635 497 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 CXCR5P32302 372 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 ZNF699Q32M78 642 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 TOGARAM2Q6ZUX3 1019 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 XXYLT1Q8NBI6 393 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 NEK9Q8TD19 979 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 CCDC124Q96CT7 223 aaKnown RBP18.04■□□□□ 0.48
SCARB1-205ENST00000538291 AIFM3Q96NN9 605 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 SPTLC3Q9NUV7 552 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 ADAM22Q9P0K1 906 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 MOSPD1Q9UJG1 213 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 IPO5O00410 1097 aaKnown RBP18.04■□□□□ 0.48
SCARB1-205ENST00000538291 SFNP31947 248 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 GPSM2P81274 684 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 DR1Q01658 176 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 RNF217Q8TC41 542 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 PYROXD1Q8WU10 500 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 ALKBH8Q96BT7 664 aaKnown RBP18.04■□□□□ 0.48
SCARB1-205ENST00000538291 FAM20AQ96MK3 541 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 ZNF302Q9NR11 478 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 UTYO14607 1347 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 TJP3O95049 919 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 PAPOLAP51003 745 aaKnown RBP18.04■□□□□ 0.48
SCARB1-205ENST00000538291 KLC2Q9H0B6 622 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 C2orf40Q9H1Z8 148 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 PRR36Q9H6K5 1346 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 NDUFA10O95299 355 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 SLC8A1P32418 973 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 SLC10A5Q5PT55 438 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 MFSD14CQ5VZR4 134 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 BANK1Q8NDB2 785 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 MMTAG2Q9BU76 263 aaKnown RBP18.04■□□□□ 0.48
SCARB1-205ENST00000538291 LCMT1Q9UIC8 334 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 HPCAL4Q9UM19 191 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
SCARB1-205ENST00000538291 COL15A1P39059 1388 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 IQANK1A0A1B0GTG1 560 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 C2orf54Q08AI8 447 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 ERVK-7P63135 1459 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 ZBBXA8MT70 800 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 NNMTP40261 264 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 RESTQ13127 1097 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 TFDP2Q14188 446 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 ZNF394Q53GI3 561 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 TAF1BQ53T94 588 aaPredicted RBP18.03■□□□□ 0.48
SCARB1-205ENST00000538291 TBC1D9BQ66K14 1250 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 CHAMP1Q96JM3 812 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 MTRQ99707 1265 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 NRBP1Q9UHY1 535 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 ZBTB7AO95365 584 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 SPP2Q13103 211 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 LRRC43Q8N309 656 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 SUCLA2Q9P2R7 463 aaPredicted RBP18.03■□□□□ 0.48
SCARB1-205ENST00000538291 PFKFB3Q16875 520 aaPredicted RBP18.03■□□□□ 0.48
SCARB1-205ENST00000538291 VSTM4Q8IW00 320 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 TBK1Q9UHD2 729 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 DNAJC12Q9UKB3 198 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 PTCH1Q13635 1447 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 TAC1P20366 129 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 COPB2P35606 906 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 HP1BP3Q5SSJ5 553 aaPredicted RBP18.03■□□□□ 0.48
SCARB1-205ENST00000538291 GINM1Q9NU53 330 aa18.03■□□□□ 0.48
SCARB1-205ENST00000538291 GPC3P51654 580 aa18.02■□□□□ 0.48
SCARB1-205ENST00000538291 PTPN21Q16825 1174 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms