RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PPP6R3Q5H9R7 873 aaPredicted RBP19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 CLEC4GQ6UXB4 293 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 MCPH1Q8NEM0 835 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 FAF2Q96CS3 445 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 THEGQ9P2T0 379 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 PYCARDQ9ULZ3 195 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 ZNF500O60304 480 aaPredicted RBP19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 HUS1O60921 280 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 SLC27A3Q5K4L6 730 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 SCN4BQ8IWT1 228 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 RAVER2Q9HCJ3 691 aaKnown RBP19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 SOWAHDA6NJG2 315 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 PAPOLAP51003 745 aaKnown RBP19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 NOP14P78316 857 aaKnown RBP19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 TAF1BQ53T94 588 aaPredicted RBP19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 TTLL11Q8NHH1 800 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 XAB2Q9HCS7 855 aaKnown RBP19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 ARAP3Q8WWN8 1544 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 PLEKHA8P1O95397 391 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 IFT88Q13099 833 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 RHOT2Q8IXI1 618 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 PIGOQ8TEQ8 1089 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 WRNIP1Q96S55 665 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 RPS6KA4O75676 772 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 APOEP02649 317 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 PRELPP51888 382 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 RASIP1Q5U651 963 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 ATG16L1Q676U5 607 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 ANGPTL8Q6UXH0 198 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 FRA10AC1Q70Z53 315 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 URGCPQ8TCY9 931 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 KLC2Q9H0B6 622 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 RASGRF2O14827 1237 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 MAP2K2P36507 400 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 OCRLQ01968 901 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 SNRNP48Q6IEG0 339 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 NEK9Q8TD19 979 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 CHAMP1Q96JM3 812 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 TUBB6Q9BUF5 446 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 ATP7BP35670 1465 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 TMEM247A6NEH6 219 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 ZBTB5O15062 677 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 TJP3O95049 919 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 KIAA1586Q9HCI6 787 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 HACD3Q9P035 362 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 CTNND1O60716 968 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 CNOT10Q9H9A5 744 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 HPCAL4Q9UM19 191 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 USP17L5A8MUK1 530 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 IPO5O00410 1097 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 ZNF394Q53GI3 561 aa19.49■□□□□ 0.71
SFSWAP-203ENST00000535236 ABCA5Q8WWZ7 1642 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 WDR91A4D1P6 747 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 LRRC31Q6UY01 552 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 BANK1Q8NDB2 785 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 GIPC2Q8TF65 315 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 ZBTB18Q99592 522 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 KIAA1755Q5JYT7 1200 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 BEST2Q8NFU1 509 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 AP1M1Q9BXS5 423 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 KLHL8Q9P2G9 620 aaPredicted RBP19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 USP6P35125 1406 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 NDUFA10O95299 355 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 ZNF699Q32M78 642 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 ZNF568Q3ZCX4 644 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 SAMD9Q5K651 1589 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 ALKBH5Q6P6C2 394 aaKnown RBP19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 TBC1D22BQ9NU19 505 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 CFLARO15519 480 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 NSUN2Q08J23 767 aaKnown RBP eCLIP19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 IFT43Q96FT9 208 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 ADAM22Q9P0K1 906 aa19.48■□□□□ 0.71
SFSWAP-203ENST00000535236 CFAP65Q6ZU64 1925 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 ECE2O60344 883 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 SASH1O94885 1247 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 SEC31AO94979 1220 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 DRP2Q13474 957 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 TTC30BQ8N4P2 665 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 NEMP1O14524 444 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 MB21D1Q8N884 522 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 TMEM35BQ8NCS4 154 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 NSUN6Q8TEA1 469 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 FMO2Q99518 471 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 FSD1LQ9BXM9 530 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 CFAP74Q9C0B2 1584 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 A0A087WWV3 80 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 ESRRBO95718 433 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 VSTM4Q8IW00 320 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 ZMYND12Q9H0C1 365 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 TDRD3Q9H7E2 651 aaKnown RBP19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 ASNSD1Q9NWL6 643 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 DNAJC12Q9UKB3 198 aa19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 PACSIN2Q9UNF0 486 aaPredicted RBP19.47■□□□□ 0.71
SFSWAP-203ENST00000535236 IFNA8P32881 189 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 GPC3P51654 580 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 SLC10A5Q5PT55 438 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 UBE2Q2Q8WVN8 375 aa19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 NKX1-1Q15270 411 aaPredicted RBP19.46■□□□□ 0.71
SFSWAP-203ENST00000535236 PDCD6IPQ8WUM4 868 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms