RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GINS2Q9Y248 185 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 COL4A6Q14031 1691 aa9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 TCF20Q9UGU0 1960 aaKnown RBP9.66□□□□□ -0.86
SFSWAP-202ENST00000535202 IGSF9BQ9UPX0 1349 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 ESPNB1AK53 854 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 WDR64B1ANS9 1081 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 ENPP3O14638 875 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 MSH4O15457 936 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 EDIL3O43854 480 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 GAS7O60861 476 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 CDKL5O76039 1030 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 ATP4AP20648 1035 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 IBSPP21815 317 aaPredicted RBP9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 USP11P51784 963 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 SCRN1Q12765 414 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 AAK1Q2M2I8 961 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 TMEM266Q2M3C6 531 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 TMEM192Q8IY95 271 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 NME8Q8N427 588 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 FIBCD1Q8N539 461 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 ADAMTS19Q8TE59 1207 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 LINC01599Q8WXQ3 324 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 GJA10Q969M2 543 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 IL17RAQ96F46 866 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 SAMD11Q96NU1 681 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 TEKT3Q9BXF9 490 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 SLKQ9H2G2 1235 aaPredicted RBP9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 LMCD1Q9NZU5 365 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 PADI3Q9ULW8 664 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 PCDHA10Q9Y5I2 948 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 MAFBQ9Y5Q3 323 aaPredicted RBP9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 SQORQ9Y6N5 450 aa9.65□□□□□ -0.86
SFSWAP-202ENST00000535202 TTC3P53804 2025 aa9.65□□□□□ -0.87
SFSWAP-202ENST00000535202 ADGRA3Q8IWK6 1321 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 KDM3AQ9Y4C1 1321 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 KIAA1671Q9BY89 1806 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 ZBTB42B2RXF5 422 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 DTNBO60941 627 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 TDP2O95551 362 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 C22orf31O95567 290 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 XRCC6P12956 609 aaKnown RBP eCLIP9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 PTMSP20962 102 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 CTNNB1P35222 781 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 KCNQ1P51787 676 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 ANAPC15P60006 121 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 NFX1Q12986 1120 aaKnown RBP9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 GPM6BQ13491 265 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 NONOQ15233 471 aaKnown RBP eCLIP9.64□□□□□ -0.873e-6■■■□□ 16
SFSWAP-202ENST00000535202 C8orf34Q49A92 452 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 LRCH2Q5VUJ6 765 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 KIAA0319LQ8IZA0 1049 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 METTL13Q8N6R0 699 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 DAGLBQ8NCG7 672 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 SLC5A5Q92911 643 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 HLA-CQ95604 372 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 FAM167AQ96KS9 214 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 UHRF1Q96T88 793 aaPredicted RBP9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 FTHL17Q9BXU8 183 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 UNC45AQ9H3U1 944 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 DISC1Q9NRI5 854 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 TPCN1Q9ULQ1 816 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 KCNJ14Q9UNX9 436 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 COG5Q9UP83 839 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 CEP131Q9UPN4 1083 aa9.64□□□□□ -0.87
SFSWAP-202ENST00000535202 STK36Q9NRP7 1315 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 H3BNC9 293 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 M0R2N6 131 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 TNFRSF10AO00220 468 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 PFKFB2O60825 505 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 RPS6KA5O75582 802 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 VTNP04004 478 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 OATP04181 439 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 SFNP31947 248 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 CLCN3P51790 818 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 JAK3P52333 1124 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 AK2P54819 239 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 PRKCEQ02156 737 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 BTG3Q14201 252 aaPredicted RBP9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 NPY5RQ15761 445 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 UGCGQ16739 394 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 PTPROQ16827 1216 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 INF2Q27J81 1249 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 Q4G0T1 1027 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 GALNT17Q6IS24 598 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 KRT25Q7Z3Z0 450 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 RTN4RL1Q86UN2 441 aaPredicted RBP9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 NPAS4Q8IUM7 802 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 MRPL38Q96DV4 380 aaKnown RBP9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 NECAB3Q96P71 396 aaPredicted RBP9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 RIT2Q99578 217 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 OSMRQ99650 979 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 TMX1Q9H3N1 280 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 CDHR5Q9HBB8 845 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 RC3H2Q9HBD1 1191 aaKnown RBP9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 ERVK-5Q9HDB9 667 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 LRFN2Q9ULH4 789 aa9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 NOC2LQ9Y3T9 749 aaKnown RBP9.63□□□□□ -0.87
SFSWAP-202ENST00000535202 ATG2AQ2TAZ0 1938 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 CYP3A7-CYP3A51PA0A087WV96 503 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms