RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 ARL1P40616 181 aaPredicted RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 KRT76Q01546 638 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 RUNDC3BQ96NL0 473 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 RIOK1Q9BRS2 568 aaKnown RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 TACO1Q9BSH4 297 aaKnown RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 A0A1W2PQC6 194 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 K7ERI5 159 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 IPO5O00410 1097 aaKnown RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 ATF2P15336 505 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 TFAMQ00059 246 aaKnown RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 LGSNQ5TDP6 509 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 RAB3IPQ96QF0 476 aaPredicted RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 EIF2AK1Q9BQI3 630 aaKnown RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 VCX3AQ9NNX9 186 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 DNAJC12Q9UKB3 198 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 ZNF148Q9UQR1 794 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 ENTPD3O75355 529 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 P4HBP07237 508 aaKnown RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 RASIP1Q5U651 963 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 KAZNQ674X7 775 aa18.61■□□□□ 0.57
PHRF1-206ENST00000534320 NSUN6Q8TEA1 469 aaKnown RBP18.61■□□□□ 0.57
PHRF1-206ENST00000534320 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.6■□□□□ 0.57
PHRF1-206ENST00000534320 ZNF233A6NK53 670 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 ATP1A2P50993 1020 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 IRX5P78411 483 aaPredicted RBP18.6■□□□□ 0.57
PHRF1-206ENST00000534320 BFSP1Q12934 665 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 P3H4Q92791 437 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 KCNF1Q9H3M0 494 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 PPANQ9NQ55 473 aaKnown RBP18.6■□□□□ 0.57
PHRF1-206ENST00000534320 NDUFB10O96000 172 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 ANKRD40Q6AI12 368 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 FBXO38Q6PIJ6 1188 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 ZBTB33Q86T24 672 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 LIMA1Q9UHB6 759 aaKnown RBP18.6■□□□□ 0.57
PHRF1-206ENST00000534320 DAAM1Q9Y4D1 1078 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 BCL9O00512 1426 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 LIG3P49916 1009 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 COG7P83436 770 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 CASC4Q6P4E1 433 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 LDHDQ86WU2 507 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 MCPH1Q8NEM0 835 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 SEL1LQ9UBV2 794 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 FAF1Q9UNN5 650 aaPredicted RBP18.6■□□□□ 0.57
PHRF1-206ENST00000534320 QARSP47897 775 aaKnown RBP18.6■□□□□ 0.57
PHRF1-206ENST00000534320 STXBP2Q15833 593 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 SNCBQ16143 134 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 XXYLT1Q8NBI6 393 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 RNF169Q8NCN4 708 aa18.6■□□□□ 0.57
PHRF1-206ENST00000534320 A0A1B0GTH6 734 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 PPP1R2P3Q6NXS1 205 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 SESTD1Q86VW0 696 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 BBOF1Q8ND07 529 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 ZMAT2Q96NC0 199 aaKnown RBP18.59■□□□□ 0.57
PHRF1-206ENST00000534320 MED10Q9BTT4 135 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 ZMYND12Q9H0C1 365 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 TPX2Q9ULW0 747 aaKnown RBP18.59■□□□□ 0.57
PHRF1-206ENST00000534320 FAN1Q9Y2M0 1017 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 PTPN22Q9Y2R2 807 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 ADSSL1Q8N142 457 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 FBXO40Q9UH90 709 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 BCAP29Q9UHQ4 241 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 ZNRF3Q9ULT6 936 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 SIGLEC1Q9BZZ2 1709 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 SLFN12LQ6IEE8 588 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 PALM2Q8IXS6 379 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 LXNQ9BS40 222 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 CAPS2Q9BXY5 557 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 TLR3O15455 904 aaKnown RBP18.59■□□□□ 0.57
PHRF1-206ENST00000534320 MGEA5O60502 916 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 SMIM24O75264 130 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 SMARCA1P28370 1054 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 UHMK1Q8TAS1 419 aaKnown RBP18.59■□□□□ 0.57
PHRF1-206ENST00000534320 MSTO1Q9BUK6 570 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 ATP6V0A4Q9HBG4 840 aa18.59■□□□□ 0.57
PHRF1-206ENST00000534320 MAN1A1P33908 653 aa18.58■□□□□ 0.57
PHRF1-206ENST00000534320 ANKRD42Q8N9B4 389 aa18.58■□□□□ 0.57
PHRF1-206ENST00000534320 SFNP31947 248 aa18.58■□□□□ 0.57
PHRF1-206ENST00000534320 GSDMBQ8TAX9 411 aa18.58■□□□□ 0.57
PHRF1-206ENST00000534320 C7orf25Q9BPX7 421 aa18.58■□□□□ 0.57
PHRF1-206ENST00000534320 HOMER3Q9NSC5 361 aa18.58■□□□□ 0.57
PHRF1-206ENST00000534320 TTC36A6NLP5 189 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 CEP55Q53EZ4 464 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 CCDC125Q86Z20 511 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 MGARPQ8TDB4 240 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 WHAMMQ8TF30 809 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 AGXT2Q9BYV1 514 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 TNS2Q63HR2 1409 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 UBE2Q2LH0YL09 131 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 SRGAP2CP0DJJ0 459 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 APOBEC3FQ8IUX4 373 aaKnown RBP18.58■□□□□ 0.56
PHRF1-206ENST00000534320 MRPL47Q9HD33 250 aaKnown RBP18.58■□□□□ 0.56
PHRF1-206ENST00000534320 MAD2L2Q9UI95 211 aa18.58■□□□□ 0.56
PHRF1-206ENST00000534320 RNF40O75150 1001 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 RHOBTB3O94955 611 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 GRIN1Q05586 938 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 HSP90AA5PQ58FG0 334 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 APOL6Q9BWW8 343 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 HSPA6P17066 643 aa18.57■□□□□ 0.56
PHRF1-206ENST00000534320 CNGA1P29973 690 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms