RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 INHAP05111 366 aa24.4■■□□□ 1.5
PACSIN3-209ENST00000532457 PRKAR2AP13861 404 aaKnown RBP24.4■■□□□ 1.5
PACSIN3-209ENST00000532457 CACNB2Q08289 660 aaPredicted RBP24.4■■□□□ 1.5
PACSIN3-209ENST00000532457 ACVR2BQ13705 512 aa24.4■■□□□ 1.5
PACSIN3-209ENST00000532457 PLA2G4FQ68DD2 849 aa24.4■■□□□ 1.5
PACSIN3-209ENST00000532457 DHX37Q8IY37 1157 aaKnown RBP24.4■■□□□ 1.5
PACSIN3-209ENST00000532457 ADSSL1Q8N142 457 aa24.4■■□□□ 1.5
PACSIN3-209ENST00000532457 SH3TC2Q8TF17 1288 aa24.4■■□□□ 1.5
PACSIN3-209ENST00000532457 MAFBQ9Y5Q3 323 aaPredicted RBP24.4■■□□□ 1.5
PACSIN3-209ENST00000532457 BACH1O14867 736 aa24.39■■□□□ 1.49
PACSIN3-209ENST00000532457 STX17P56962 302 aa24.39■■□□□ 1.49
PACSIN3-209ENST00000532457 SEPT1Q8WYJ6 367 aa24.39■■□□□ 1.49
PACSIN3-209ENST00000532457 ARHGEF35A5YM69 484 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 SFI1A8K8P3 1242 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 BECN2A8MW95 431 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 ADCY6O43306 1168 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 KRT18P05783 430 aaKnown RBP24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 ARHGAP1Q07960 439 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 PADI6Q6TGC4 694 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 MCOLN1Q9GZU1 580 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 TBC1D7Q9P0N9 293 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 ZHX1Q9UKY1 873 aaPredicted RBP24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 IGSF9BQ9UPX0 1349 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 IKBKBO14920 756 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 SMPD1P17405 629 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 ERCC5P28715 1186 aaPredicted RBP24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 TCF7P36402 384 aaPredicted RBP24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 MAP3K21Q5TCX8 1036 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 ATP6V0A1Q93050 837 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 SPATA33Q96N06 139 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 ZNF302Q9NR11 478 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 ANKEF1Q9NU02 776 aa24.38■■□□□ 1.49
PACSIN3-209ENST00000532457 TRIM32Q13049 653 aa24.37■■□□□ 1.49
PACSIN3-209ENST00000532457 LRRC41Q15345 812 aa24.37■■□□□ 1.49
PACSIN3-209ENST00000532457 HERC4Q5GLZ8 1057 aaPredicted RBP24.37■■□□□ 1.49
PACSIN3-209ENST00000532457 CCDC65Q8IXS2 484 aa24.37■■□□□ 1.49
PACSIN3-209ENST00000532457 ENOX1Q8TC92 643 aaKnown RBP24.37■■□□□ 1.49
PACSIN3-209ENST00000532457 CCDC47Q96A33 483 aaKnown RBP24.37■■□□□ 1.49
PACSIN3-209ENST00000532457 HMX1Q9NP08 348 aaPredicted RBP24.37■■□□□ 1.49
PACSIN3-209ENST00000532457 DACH1Q9UI36 760 aa24.37■■□□□ 1.49
PACSIN3-209ENST00000532457 CTNND2Q9UQB3 1225 aa24.37■■□□□ 1.49
PACSIN3-209ENST00000532457 CYBAP13498 195 aa24.36■■□□□ 1.49
PACSIN3-209ENST00000532457 PMS1P54277 932 aaKnown RBP24.36■■□□□ 1.49
PACSIN3-209ENST00000532457 MYL5Q02045 173 aa24.36■■□□□ 1.49
PACSIN3-209ENST00000532457 PRKCEQ02156 737 aa24.36■■□□□ 1.49
PACSIN3-209ENST00000532457 CCDC144BQ3MJ40 725 aa24.36■■□□□ 1.49
PACSIN3-209ENST00000532457 XKR9Q5GH70 373 aa24.36■■□□□ 1.49
PACSIN3-209ENST00000532457 DAW1Q8N136 415 aa24.36■■□□□ 1.49
PACSIN3-209ENST00000532457 ZHX3Q9H4I2 956 aa24.36■■□□□ 1.49
PACSIN3-209ENST00000532457 FANCLQ9NW38 375 aa24.36■■□□□ 1.49
PACSIN3-209ENST00000532457 ZNF865P0CJ78 1059 aaPredicted RBP24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 CNGA1P29973 690 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 MAPK7Q13164 816 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 PSMD2Q13200 908 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 CT47A1Q5JQC4 288 aaPredicted RBP24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 SMTNL1A8MU46 457 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 GOLGA6L19H0YKK7 550 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 GUCY2CP25092 1073 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 MAEAQ7L5Y9 396 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 SFR1Q86XK3 245 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 NELFBQ8WX92 580 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 ARMC5Q96C12 935 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 FAM184BQ9ULE4 1060 aa24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 MYH9P35579 1960 aaKnown RBP24.35■■□□□ 1.49
PACSIN3-209ENST00000532457 SEPT4O43236 478 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 LGR5O75473 907 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 AKR1A1P14550 325 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 STAT5BP51692 787 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 FAM26FQ5R3K3 315 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 IQSEC1Q6DN90 963 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 TRIM50Q86XT4 487 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 AFAP1L1Q8TED9 768 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 KCND2Q9NZV8 630 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 BRCA2P51587 3418 aa24.34■■□□□ 1.49
PACSIN3-209ENST00000532457 GH1P01241 217 aa24.33■■□□□ 1.49
PACSIN3-209ENST00000532457 LAMC2Q13753 1193 aa24.33■■□□□ 1.49
PACSIN3-209ENST00000532457 DUSP28Q4G0W2 176 aa24.33■■□□□ 1.49
PACSIN3-209ENST00000532457 COBLL1Q53SF7 1204 aa24.33■■□□□ 1.49
PACSIN3-209ENST00000532457 ZNF333Q96JL9 665 aa24.33■■□□□ 1.49
PACSIN3-209ENST00000532457 RWDD2AQ9UIY3 292 aa24.33■■□□□ 1.49
PACSIN3-209ENST00000532457 TRIM49BA6NDI0 452 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 NOP56O00567 594 aaKnown RBP24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 MSCO60682 206 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 USO1O60763 962 aaKnown RBP24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 HIP1RO75146 1068 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 ATP1A3P13637 1013 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 CASP5P51878 434 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 PLCB2Q00722 1185 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 XKR3Q5GH77 459 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 OTUD6AQ7L8S5 288 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 CEP170P1Q96L14 293 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 CEP89Q96ST8 783 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 SEMA6BQ9H3T3 888 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 PDLIM7Q9NR12 457 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 SAMSN1Q9NSI8 373 aaKnown RBP24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 NFE2L3Q9Y4A8 694 aa24.33■■□□□ 1.48
PACSIN3-209ENST00000532457 DKC1O60832 514 aaKnown RBP eCLIP24.32■■□□□ 1.48
PACSIN3-209ENST00000532457 ZNF131P52739 623 aa24.32■■□□□ 1.48
PACSIN3-209ENST00000532457 PAK1Q13153 545 aa24.32■■□□□ 1.48
PACSIN3-209ENST00000532457 HSP90AA4PQ58FG1 418 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms