RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 PUM1Q14671 1186 aaKnown RBP eCLIP4.28□□□□□ -1.72
BRCA2-203ENST00000528762 BROXQ5VW32 411 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 ERICH6BQ5W0A0 696 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 DBX2Q6ZNG2 339 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 ARHGAP36Q6ZRI8 547 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 CABP7Q86V35 215 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 TCEAL8Q8IYN2 117 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 CARFQ8N187 725 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 FAM26EQ8N5C1 309 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 SLC5A5Q92911 643 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 FUBP3Q96I24 572 aaKnown RBP eCLIP4.28□□□□□ -1.72
BRCA2-203ENST00000528762 MTA3Q9BTC8 594 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 BOCQ9BWV1 1114 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 VTA1Q9NP79 307 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 SPATA6Q9NWH7 488 aaPredicted RBP4.28□□□□□ -1.72
BRCA2-203ENST00000528762 FBXL7Q9UJT9 491 aa4.28□□□□□ -1.72
BRCA2-203ENST00000528762 NOC2LQ9Y3T9 749 aaKnown RBP4.28□□□□□ -1.72
BRCA2-203ENST00000528762 WASHC2AQ641Q2 1341 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 GOLGA6CA6NDK9 693 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 GOLGA6BA6NDN3 693 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 C22orf46C9J442 243 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 K7ESM1 405 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 CAND2O75155 1236 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 RFPL1O75677 317 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 DGKIO75912 1065 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 SNUPNO95149 360 aaKnown RBP4.27□□□□□ -1.73
BRCA2-203ENST00000528762 AMY2AP04746 511 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 C8BP07358 591 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 GOLGA6DP0CG33 693 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 SLC9A1P19634 815 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 AMY2BP19961 511 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 LSP1P33241 339 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 EFEMP1Q12805 493 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 UBE4AQ14139 1066 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 DDB1Q16531 1140 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 FAM102BQ5T8I3 360 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 PGM2L1Q6PCE3 622 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 HHIPL2Q6UWX4 724 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 OTOP3Q7RTS5 596 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 RASSF3Q86WH2 238 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 TEX2Q8IWB9 1127 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 EFHBQ8N7U6 833 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 TTC8Q8TAM2 541 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 JPH3Q8WXH2 748 aaPredicted RBP4.27□□□□□ -1.73
BRCA2-203ENST00000528762 FAXDC2Q96IV6 333 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 RNF38Q9H0F5 515 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 ARNT2Q9HBZ2 717 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 TCF7L1Q9HCS4 588 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 GOLGA6AQ9NYA3 693 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.27□□□□□ -1.73
BRCA2-203ENST00000528762 H2AFY2Q9P0M6 372 aaPredicted RBP4.27□□□□□ -1.73
BRCA2-203ENST00000528762 MARCH2Q9P0N8 246 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 IP6K2Q9UHH9 426 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 COA3Q9Y2R0 106 aaPredicted RBP4.27□□□□□ -1.73
BRCA2-203ENST00000528762 SPO11Q9Y5K1 396 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 X6R8D5 127 aa4.27□□□□□ -1.73
BRCA2-203ENST00000528762 TCRBV5S4A2TA0A5A2 114 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 SH3D21A4FU49 640 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 GOLGA8AA7E2F4 631 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 GOLGA8BA8MQT2 603 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 ZNF561-AS1K7EIQ3 104 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 NKRFO15226 690 aaKnown RBP eCLIP4.26□□□□□ -1.73
BRCA2-203ENST00000528762 TGM5O43548 720 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 NOBOXO60393 691 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 CFBP00751 764 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 CT47B1P0C2W7 299 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-203ENST00000528762 ATF3P18847 181 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 GJA9P57773 515 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 IRF9Q00978 393 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 KLF1Q13351 362 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-203ENST00000528762 HLTFQ14527 1009 aaKnown RBP eCLIP4.26□□□□□ -1.73
BRCA2-203ENST00000528762 MLC1Q15049 377 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 TERF2Q15554 542 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 SPATS1Q496A3 300 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 EXOC8Q8IYI6 725 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 NLGN4XQ8N0W4 816 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 CLRN3Q8NCR9 226 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 PLEKHO2Q8TD55 490 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 TSPAN17Q96FV3 270 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 PSMD1Q99460 953 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 ELF4Q99607 663 aaPredicted RBP4.26□□□□□ -1.73
BRCA2-203ENST00000528762 GORASP1Q9BQQ3 440 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 SLC13A1Q9BZW2 595 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 EPB41L1Q9H4G0 881 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 SMURF1Q9HCE7 757 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 CHST12Q9NRB3 414 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 C14orf119Q9NWQ9 140 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 NOB1Q9ULX3 412 aaKnown RBP4.26□□□□□ -1.73
BRCA2-203ENST00000528762 ANKRD6Q9Y2G4 727 aa4.26□□□□□ -1.73
BRCA2-203ENST00000528762 LUC7L2Q9Y383 392 aaKnown RBP4.26□□□□□ -1.73
BRCA2-203ENST00000528762 KRIT1O00522 736 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 HIP1RO75146 1068 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 CYP17A1P05093 508 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 KRT18P05783 430 aaKnown RBP4.25□□□□□ -1.73
BRCA2-203ENST00000528762 U2AF1L5P0DN76 240 aaPredicted RBP4.25□□□□□ -1.73
BRCA2-203ENST00000528762 FPR2P25090 351 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 SARSP49591 514 aaKnown RBP4.25□□□□□ -1.73
BRCA2-203ENST00000528762 SCAND1P57086 179 aa4.25□□□□□ -1.73
BRCA2-203ENST00000528762 U2AF1Q01081 240 aaKnown RBP eCLIP4.25□□□□□ -1.73
BRCA2-203ENST00000528762 CACNB2Q08289 660 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms