RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 NR2E1Q9Y466 385 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 USP15Q9Y4E8 981 aaPredicted RBP4.79□□□□□ -1.64
CHD7-205ENST00000527825 R4GN57 208 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 MIA3Q5JRA6 1907 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 DMXL1Q9Y485 3027 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 PLXNA4Q9HCM2 1894 aa4.79□□□□□ -1.64
CHD7-205ENST00000527825 FAM208BQ5VWN6 2430 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 ASTN1O14525 1302 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 A0A1W2PRG0 241 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 KRBA1A5PL33 1030 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 VWA5AO00534 786 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 DYNC1I1O14576 645 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 CIAO1O76071 339 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 RB1P06400 928 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 SRGAP2BP0DMP2 458 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 MAPTP10636 758 aaKnown RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 EPXP11678 715 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 CD33P20138 364 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 SP100P23497 879 aaPredicted RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 BRD2P25440 801 aaKnown RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 COL8A1P27658 744 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 ADORA1P30542 326 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 MCM5P33992 734 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 GTF2F1P35269 517 aaKnown RBP eCLIP4.78□□□□□ -1.64
CHD7-205ENST00000527825 IL15P40933 162 aaPredicted RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 ZNF445P59923 1031 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 RBM10P98175 930 aaKnown RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 LMNB2Q03252 620 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 PTPN11Q06124 597 aaPredicted RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 COASYQ13057 564 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 PTGISQ16647 500 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 IQSEC1Q6DN90 963 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 NFRKBQ6P4R8 1299 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 LINC00114Q6XXX2 140 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 GAS2L3Q86XJ1 694 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 CCDC105Q8IYK2 499 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 CPXCR1Q8N123 301 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 FIBCD1Q8N539 461 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 DTWD2Q8NBA8 298 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 SMRP1Q8NCR6 262 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 RHPN1Q8TCX5 695 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 ZNF384Q8TF68 577 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 TRIM44Q96DX7 344 aaPredicted RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 MSLNLQ96KJ4 702 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 NEUROD6Q96NK8 337 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 RTP3Q9BQQ7 232 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 EHD4Q9H223 541 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 VCPKMTQ9H867 229 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 FBXO40Q9UH90 709 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 ZNF214Q9UL59 606 aaPredicted RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 USP18Q9UMW8 372 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 GNEQ9Y223 722 aaKnown RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 AKAP2Q9Y2D5 859 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 Q9Y3F1 56 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 GPC6Q9Y625 555 aaPredicted RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 CHD6Q8TD26 2715 aa4.78□□□□□ -1.64
CHD7-205ENST00000527825 BAZ2AQ9UIF9 1905 aaKnown RBP4.78□□□□□ -1.64
CHD7-205ENST00000527825 GVINP1Q7Z2Y8 2422 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 DNAJC25-GNG10A0A024R161 153 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 APAF1O14727 1248 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 KHNYNO15037 678 aaKnown RBP4.77□□□□□ -1.65
CHD7-205ENST00000527825 KPNA6O60684 536 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 KINO60870 393 aaKnown RBP4.77□□□□□ -1.65
CHD7-205ENST00000527825 ADAM23O75077 832 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 ZBED4O75132 1171 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 POLR3DP05423 398 aaPredicted RBP4.77□□□□□ -1.65
CHD7-205ENST00000527825 ATF7P17544 494 aaPredicted RBP4.77□□□□□ -1.65
CHD7-205ENST00000527825 GUCY1A2P33402 732 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 NRIP1P48552 1158 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 DGKGP49619 791 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 TIMM10P62072 90 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 HTRA4P83105 476 aaPredicted RBP4.77□□□□□ -1.65
CHD7-205ENST00000527825 PURAQ00577 322 aaKnown RBP4.77□□□□□ -1.65
CHD7-205ENST00000527825 ICA1Q05084 483 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 TNP2Q05952 138 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 DMTNQ08495 405 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 KLHL40Q2TBA0 621 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 PPM1JQ5JR12 505 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 SAMD5Q5TGI4 173 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 TMEM164Q5U3C3 297 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.77□□□□□ -1.652e-13■■■■■ 61.3
CHD7-205ENST00000527825 TMEM179Q6ZVK1 233 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 EEPD1Q7L9B9 569 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 ATG9AQ7Z3C6 839 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 OR6J1Q8NGC5 347 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 PPP1R13LQ8WUF5 828 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 BTBD6Q96KE9 485 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 GBP4Q96PP9 640 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 SUV39H2Q9H5I1 410 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 FBXO28Q9NVF7 368 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 HMG20BQ9P0W2 317 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 FBXL21Q9UKT6 434 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 PPP1R9AQ9ULJ8 1098 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 BARX2Q9UMQ3 279 aaPredicted RBP4.77□□□□□ -1.65
CHD7-205ENST00000527825 NOL7Q9UMY1 257 aaKnown RBP4.77□□□□□ -1.65
CHD7-205ENST00000527825 CFAP47Q6ZTR5 3102 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 MYH7P12883 1935 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 CHD8Q9HCK8 2581 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 ZNF292O60281 2723 aa4.77□□□□□ -1.65
CHD7-205ENST00000527825 MYO15AQ9UKN7 3530 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms