RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 GUCA1BQ9UMX6 200 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 AFG3L2Q9Y4W6 797 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 COL11A1P12107 1806 aaPredicted RBP17.51■□□□□ 0.39
USH1C-204ENST00000526313 IPO7O95373 1038 aaKnown RBP17.51■□□□□ 0.39
USH1C-204ENST00000526313 AFPP02771 609 aaKnown RBP17.51■□□□□ 0.39
USH1C-204ENST00000526313 MAPTP10636 758 aaKnown RBP17.51■□□□□ 0.39
USH1C-204ENST00000526313 EPS15P42566 896 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 QARSP47897 775 aaKnown RBP17.51■□□□□ 0.39
USH1C-204ENST00000526313 BAATQ14032 418 aaPredicted RBP17.51■□□□□ 0.39
USH1C-204ENST00000526313 SH3D19Q5HYK7 790 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 PADI6Q6TGC4 694 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 CACNA2D4Q7Z3S7 1137 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 KIAA1328Q86T90 577 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 EHBP1Q8NDI1 1231 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 MKNK1Q9BUB5 465 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 DMAC2Q9NW81 257 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 FZD1Q9UP38 647 aa17.51■□□□□ 0.39
USH1C-204ENST00000526313 TLR2O60603 784 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 ATP9AO75110 1047 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 KIF11P52732 1056 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 SUPT20HL1Q3ZLR7 823 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 ZC2HC1CQ53FD0 456 aaPredicted RBP17.5■□□□□ 0.39
USH1C-204ENST00000526313 STXBP4Q6ZWJ1 553 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 SRGAP1Q7Z6B7 1085 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 FAM178BQ8IXR5 827 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.5■□□□□ 0.39
USH1C-204ENST00000526313 TMEM174Q8WUU8 243 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 AIPL1Q9NZN9 384 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 PKD2L1Q9P0L9 805 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 PCDHB13Q9Y5F0 798 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 MYPNQ86TC9 1320 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 RBAK-RBAKDNI3L0D1 243 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 MAFGO15525 162 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 HIP1RO75146 1068 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 XRCC5P13010 732 aaKnown RBP17.5■□□□□ 0.39
USH1C-204ENST00000526313 CASP4P49662 377 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 RARRES1P49788 294 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 CYP27A1Q02318 531 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 SPA17Q15506 151 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 ARHGEF16Q5VV41 709 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 NSMFQ6X4W1 530 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 C4orf19Q8IY42 314 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 SLC35C1Q96A29 364 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 SENP7Q9BQF6 1050 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 TSGA10Q9BZW7 698 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 TFR2Q9UP52 801 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 PCDHA13Q9Y5I0 950 aa17.5■□□□□ 0.39
USH1C-204ENST00000526313 SBF1O95248 1867 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 GTPBP10A4D1E9 387 aaKnown RBP17.49■□□□□ 0.39
USH1C-204ENST00000526313 PJA2O43164 708 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 USP2O75604 605 aaPredicted RBP17.49■□□□□ 0.39
USH1C-204ENST00000526313 EPB41P11171 864 aaKnown RBP17.49■□□□□ 0.39
USH1C-204ENST00000526313 SFNP31947 248 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 JAK3P52333 1124 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 POLR2FP61218 127 aaKnown RBP17.49■□□□□ 0.39
USH1C-204ENST00000526313 TMEM132BQ14DG7 1078 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 ODR4Q5SWX8 454 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 CEP112Q8N8E3 955 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 RDM1Q8NG50 284 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 RABGGTAQ92696 567 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 GPRASP2Q96D09 838 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 CRACR2AQ9BSW2 395 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 FBXL5Q9UKA1 691 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 MYH11P35749 1972 aa17.49■□□□□ 0.39
USH1C-204ENST00000526313 CLIC2O15247 247 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 SERPING1P05155 500 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 MYCLP12524 364 aaPredicted RBP17.48■□□□□ 0.39
USH1C-204ENST00000526313 KRT76Q01546 638 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 MYBPC2Q14324 1141 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 WHAMMP3Q1A5X7 153 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 SFMBT2Q5VUG0 894 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 PAPD7Q5XG87 772 aaKnown RBP17.48■□□□□ 0.39
USH1C-204ENST00000526313 SNRNP48Q6IEG0 339 aaKnown RBP17.48■□□□□ 0.39
USH1C-204ENST00000526313 SLC9A9Q8IVB4 645 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 GPR161Q8N6U8 529 aaKnown RBP17.48■□□□□ 0.39
USH1C-204ENST00000526313 NLRC4Q9NPP4 1024 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 POLR2AP24928 1970 aaKnown RBP17.48■□□□□ 0.39
USH1C-204ENST00000526313 CCNE2O96020 404 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 NR3C2P08235 984 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 CCND2P30279 289 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 PSMC2P35998 433 aaKnown RBP17.48■□□□□ 0.39
USH1C-204ENST00000526313 TUBB4BP68371 445 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 KIF5AQ12840 1032 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 GLIPR1L2Q4G1C9 344 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 TRAPPC11Q7Z392 1133 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 GOLGA5Q8TBA6 731 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 INPP4AQ96PE3 977 aaPredicted RBP17.48■□□□□ 0.39
USH1C-204ENST00000526313 TIPINQ9BVW5 301 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 HOXC10Q9NYD6 342 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 MYO6Q9UM54 1294 aa17.48■□□□□ 0.39
USH1C-204ENST00000526313 PON1P27169 355 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 ALCAMQ13740 583 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 SLC9C1Q4G0N8 1177 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 KLHDC7AQ5VTJ3 777 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 TEX13BQ9BXU2 312 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 IFIH1Q9BYX4 1025 aaKnown RBP17.47■□□□□ 0.39
USH1C-204ENST00000526313 GBP3Q9H0R5 595 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 IKZF4Q9H2S9 585 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 AGPAT3Q9NRZ7 376 aa17.47■□□□□ 0.39
USH1C-204ENST00000526313 ANKEF1Q9NU02 776 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms