RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
CTTN-210ENST00000525852 CXXC1Q9P0U4 656 aaPredicted RBP13.81□□□□□ -0.2
CTTN-210ENST00000525852 SEPT9Q9UHD8 586 aaPredicted RBP13.81□□□□□ -0.2
CTTN-210ENST00000525852 ARID2Q68CP9 1835 aa13.81□□□□□ -0.2
CTTN-210ENST00000525852 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 LAD1O00515 517 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 SPATA31C1P0DKV0 1188 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 PRPHP41219 470 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 TMEM62Q0P6H9 643 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 PKP1Q13835 747 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 FOXD4L5Q5VV16 416 aaPredicted RBP13.8□□□□□ -0.2
CTTN-210ENST00000525852 PLA2G4FQ68DD2 849 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 OTOP2Q7RTS6 562 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 RPAINQ86UA6 219 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 C4orf19Q8IY42 314 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 KIAA0319LQ8IZA0 1049 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
CTTN-210ENST00000525852 FOXD4L4Q8WXT5 416 aaPredicted RBP13.8□□□□□ -0.2
CTTN-210ENST00000525852 RNPC3Q96LT9 517 aaKnown RBP13.8□□□□□ -0.2
CTTN-210ENST00000525852 ZSWIM4Q9H7M6 989 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 CEP131Q9UPN4 1083 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 PTPRSQ13332 1948 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 A0A087WWV3 80 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 SMIM35A0A1B0GVV1 85 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 CAND2O75155 1236 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 MED24O75448 989 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 CHRNA1P02708 482 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 RFC2P35250 354 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 NPEPPSP55786 919 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 MTERF2Q49AM1 385 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 FAM26DQ5JW98 314 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 FAM109BQ6ICB4 259 aaPredicted RBP13.8□□□□□ -0.2
CTTN-210ENST00000525852 PSRC1Q6PGN9 363 aaPredicted RBP13.8□□□□□ -0.2
CTTN-210ENST00000525852 IGSF22Q8N9C0 903 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 LRWD1Q9UFC0 647 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 CLIC4Q9Y696 253 aa13.8□□□□□ -0.2
CTTN-210ENST00000525852 PP2D1A8MPX8 630 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 DKC1O60832 514 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTTN-210ENST00000525852 LYPLA2O95372 231 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 CXCL10P02778 98 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 YWHABP31946 246 aaKnown RBP13.79□□□□□ -0.2
CTTN-210ENST00000525852 FXR1P51114 621 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTTN-210ENST00000525852 CLCN3P51790 818 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 MRPS6P82932 125 aaKnown RBP13.79□□□□□ -0.2
CTTN-210ENST00000525852 MGAT3Q09327 533 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 BECN1Q14457 450 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 PDIA5Q14554 519 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 SF3A1Q15459 793 aaKnown RBP13.79□□□□□ -0.2
CTTN-210ENST00000525852 RASIP1Q5U651 963 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 DTHD1Q6ZMT9 781 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 RSPH3Q86UC2 560 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 CATSPER3Q86XQ3 398 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 RPUSD2Q8IZ73 545 aaKnown RBP13.79□□□□□ -0.2
CTTN-210ENST00000525852 LRRC71Q8N4P6 559 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 METTL13Q8N6R0 699 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 LINC01465Q8N7H1 131 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 NEK9Q8TD19 979 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 LRCH3Q96II8 777 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 ZSCAN16Q9H4T2 348 aaPredicted RBP13.79□□□□□ -0.2
CTTN-210ENST00000525852 CYP26B1Q9NR63 512 aa13.79□□□□□ -0.2
CTTN-210ENST00000525852 GBF1Q92538 1859 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 MICAL3Q7RTP6 2002 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 MAGEB2O15479 319 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 FGBP02675 491 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
CTTN-210ENST00000525852 CDC25AP30304 524 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 TBC1D8BQ0IIM8 1120 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
CTTN-210ENST00000525852 DRP2Q13474 957 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 PTPAQ15257 358 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 ECM1Q16610 540 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 LRIT3Q3SXY7 679 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 EFCAB12Q6NXP0 572 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 ERMNQ8TAM6 284 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 PIGOQ8TEQ8 1089 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 HERVK_113Q902F9 699 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 PPP1R16BQ96T49 567 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 POLR3CQ9BUI4 534 aaPredicted RBP13.78□□□□□ -0.2
CTTN-210ENST00000525852 TUFT1Q9NNX1 390 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 CDY2AQ9Y6F7 541 aa13.78□□□□□ -0.2
CTTN-210ENST00000525852 IGKV6-21A0A0C4DH24 114 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 VWA3AA6NCI4 1184 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 PARNO95453 639 aaKnown RBP13.77□□□□□ -0.21
CTTN-210ENST00000525852 VTNP04004 478 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 PFKMP08237 780 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 RPA1P27694 616 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 CCT6AP40227 531 aaKnown RBP13.77□□□□□ -0.21
CTTN-210ENST00000525852 CEBPZQ03701 1054 aaKnown RBP13.77□□□□□ -0.21
CTTN-210ENST00000525852 ARL6IP4Q66PJ3 421 aaKnown RBP13.77□□□□□ -0.21
CTTN-210ENST00000525852 POTEGQ6S5H5 508 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 NME8Q8N427 588 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 CEP170P1Q96L14 293 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 USP28Q96RU2 1077 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 MMTAG2Q9BU76 263 aaKnown RBP13.77□□□□□ -0.21
CTTN-210ENST00000525852 SUGCTQ9HAC7 445 aa13.77□□□□□ -0.21
CTTN-210ENST00000525852 CDH23Q9H251 3354 aa13.76□□□□□ -0.21
CTTN-210ENST00000525852 GRXCR1A8MXD5 290 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms