RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 RRN3P2A6NIE6 340 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 SFI1A8K8P3 1242 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 ZNF75DP51815 510 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 PCSK9Q8NBP7 692 aaKnown RBP18.47■□□□□ 0.55
BEST1-203ENST00000524877 FBF1Q8TES7 1133 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 SLC16A4O15374 487 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 ABCB4P21439 1286 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 XKR3Q5GH77 459 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 DACT2Q5SW24 774 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 AGBL1Q96MI9 1066 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 LMBRD1Q9NUN5 540 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 PIN4Q9Y237 131 aaKnown RBP18.47■□□□□ 0.55
BEST1-203ENST00000524877 VIL1P09327 827 aaKnown RBP18.47■□□□□ 0.55
BEST1-203ENST00000524877 CTSHP09668 335 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 CUL4BQ13620 913 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 TIPINQ9BVW5 301 aa18.47■□□□□ 0.55
BEST1-203ENST00000524877 C17orf102A2RUQ5 167 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 SMARCA1P28370 1054 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 NFIAQ12857 509 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 SCARA5Q6ZMJ2 495 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 AMFRQ9UKV5 643 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 KRT10P13645 584 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 YWHABP31946 246 aaKnown RBP18.46■□□□□ 0.55
BEST1-203ENST00000524877 MAP3K14Q99558 947 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 IFIH1Q9BYX4 1025 aaKnown RBP18.46■□□□□ 0.55
BEST1-203ENST00000524877 BZW2Q9Y6E2 419 aaKnown RBP18.46■□□□□ 0.55
BEST1-203ENST00000524877 EEF1GP26641 437 aaKnown RBP18.46■□□□□ 0.55
BEST1-203ENST00000524877 PPATQ06203 517 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 RESTQ13127 1097 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 CUL4AQ13619 759 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 MAP7D3Q8IWC1 876 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 NME8Q8N427 588 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 ALDH8A1Q9H2A2 487 aaPredicted RBP18.46■□□□□ 0.55
BEST1-203ENST00000524877 SLC38A10Q9HBR0 1119 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 WHAMMP3Q1A5X7 153 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 PAGE5Q96GU1 130 aa18.46■□□□□ 0.55
BEST1-203ENST00000524877 CPSF3Q9UKF6 684 aaKnown RBP18.46■□□□□ 0.55
BEST1-203ENST00000524877 RINT1Q6NUQ1 792 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 SOCS4Q8WXH5 440 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 RSAD2Q8WXG1 361 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 NAPGQ99747 312 aaPredicted RBP18.45■□□□□ 0.54
BEST1-203ENST00000524877 VPS18Q9P253 973 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 MXD4Q14582 209 aaPredicted RBP18.45■□□□□ 0.54
BEST1-203ENST00000524877 RPS6KA1Q15418 735 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 SH2D4BQ5SQS7 431 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 UNC13DQ70J99 1090 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 TXNRD3Q86VQ6 643 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.45■□□□□ 0.54
BEST1-203ENST00000524877 ACTN4O43707 911 aaKnown RBP18.45■□□□□ 0.54
BEST1-203ENST00000524877 CD58P19256 250 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 MAN2A1Q16706 1144 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 INTS8Q75QN2 995 aaKnown RBP18.45■□□□□ 0.54
BEST1-203ENST00000524877 TUBGCP2Q9BSJ2 902 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 ERAP1Q9NZ08 941 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 SEL1LQ9UBV2 794 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 RPS6KA5O75582 802 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 TDP2O95551 362 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 PTF1AQ7RTS3 328 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 RYBPQ8N488 228 aaPredicted RBP18.45■□□□□ 0.54
BEST1-203ENST00000524877 GMCL1P1Q8NEA9 526 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 OXER1Q8TDS5 423 aa18.45■□□□□ 0.54
BEST1-203ENST00000524877 POTECB2RU33 542 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 RFC5P40937 340 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 COPB1P53618 953 aaKnown RBP18.44■□□□□ 0.54
BEST1-203ENST00000524877 OR8K1Q8NGG5 319 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 E9PMD0 336 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 INPP5BP32019 993 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 ZBTB17Q13105 803 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 SAMD3Q8N6K7 520 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 SEPT10Q9P0V9 454 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 UTP11Q9Y3A2 253 aaKnown RBP18.44■□□□□ 0.54
BEST1-203ENST00000524877 SLIT3O75094 1523 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.44■□□□□ 0.54
BEST1-203ENST00000524877 STXBP3O00186 592 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 TSGA10IPQ3SY00 556 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 EPSTI1Q96J88 318 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 PPANQ9NQ55 473 aaKnown RBP18.44■□□□□ 0.54
BEST1-203ENST00000524877 RWDD2AQ9UIY3 292 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.44■□□□□ 0.54
BEST1-203ENST00000524877 TRAPPC3O43617 180 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 SRGAP2BP0DMP2 458 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 LRRC63Q05C16 580 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 FKBP1CQ5VVH2 108 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 SFR1Q86XK3 245 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 TRIM17Q9Y577 477 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
BEST1-203ENST00000524877 JMJD4Q9H9V9 463 aa18.44■□□□□ 0.54
BEST1-203ENST00000524877 VCAM1P19320 739 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 PAK2Q13177 524 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 IFT81Q8WYA0 676 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 RCOR1Q9UKL0 485 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 KPNA6O60684 536 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 SLU7O95391 586 aaKnown RBP18.43■□□□□ 0.54
BEST1-203ENST00000524877 ITIH3Q06033 890 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 PRPSAP1Q14558 356 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 GPRASP2Q96D09 838 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 CAMKK2Q96RR4 588 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 UBE2TQ9NPD8 197 aaPredicted RBP18.43■□□□□ 0.54
BEST1-203ENST00000524877 GCNT4Q9P109 453 aa18.43■□□□□ 0.54
BEST1-203ENST00000524877 PCDHA5Q9Y5H7 936 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms