RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 SPIRE1Q08AE8 756 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 PPP2R5CQ13362 524 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 TPD52L1Q16890 204 aaPredicted RBP8.38□□□□□ -1.07
CTR9-202ENST00000524523 ISM2Q6H9L7 571 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 CENPPQ6IPU0 288 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 GRAMD1CQ8IYS0 662 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 RETREG2Q8NC44 543 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
CTR9-202ENST00000524523 ZNF280CQ8ND82 737 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 SNX29Q8TEQ0 813 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 CACTINQ8WUQ7 758 aaKnown RBP8.38□□□□□ -1.07
CTR9-202ENST00000524523 LENG9Q96B70 501 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 PNMA5Q96PV4 448 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 MED15Q96RN5 788 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 NUP88Q99567 741 aaPredicted RBP8.38□□□□□ -1.07
CTR9-202ENST00000524523 FEZ1Q99689 392 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 NAA15Q9BXJ9 866 aaKnown RBP8.38□□□□□ -1.07
CTR9-202ENST00000524523 NIFKQ9BYG3 293 aaKnown RBP8.38□□□□□ -1.07
CTR9-202ENST00000524523 KCNF1Q9H3M0 494 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 CUEDC1Q9NWM3 386 aaPredicted RBP8.38□□□□□ -1.07
CTR9-202ENST00000524523 PPP1R1BQ9UD71 204 aaPredicted RBP8.38□□□□□ -1.07
CTR9-202ENST00000524523 PPP1R9AQ9ULJ8 1098 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 DNM3Q9UQ16 869 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.38□□□□□ -1.071e-11■■■□□ 16.4
CTR9-202ENST00000524523 MYH4Q9Y623 1939 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 ARFGEF1Q9Y6D6 1849 aa8.38□□□□□ -1.07
CTR9-202ENST00000524523 FRMPD4Q14CM0 1322 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 IGLV3-22A0A075B6J6 115 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 FRMD3A2A2Y4 597 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 CDK2AP1O14519 115 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 STAM2O75886 525 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 SKILP12757 684 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 ATP1A3P13637 1013 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 PTPRAP18433 802 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 ZNF76P36508 570 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 CCT6AP40227 531 aaKnown RBP8.37□□□□□ -1.07
CTR9-202ENST00000524523 PBX1P40424 430 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 MTFR1Q15390 333 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 SHROOM1Q2M3G4 852 aaPredicted RBP8.37□□□□□ -1.07
CTR9-202ENST00000524523 CEP55Q53EZ4 464 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 TCP11X2Q5H9J9 407 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 KIAA1755Q5JYT7 1200 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 APTXQ7Z2E3 356 aaKnown RBP8.37□□□□□ -1.07
CTR9-202ENST00000524523 CCDC65Q8IXS2 484 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 SPICE1Q8N0Z3 855 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 SYT2Q8N9I0 419 aaPredicted RBP8.37□□□□□ -1.07
CTR9-202ENST00000524523 TPCN2Q8NHX9 752 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 NELFBQ8WX92 580 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 SLC5A5Q92911 643 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 KLRG1Q96E93 195 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 NAP1L5Q96NT1 182 aaPredicted RBP8.37□□□□□ -1.07
CTR9-202ENST00000524523 PANX2Q96RD6 677 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 HSD17B14Q9BPX1 270 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
CTR9-202ENST00000524523 BLZF1Q9H2G9 400 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 ADARB2Q9NS39 739 aaKnown RBP8.37□□□□□ -1.07
CTR9-202ENST00000524523 ZNF358Q9NW07 568 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 NRBP1Q9UHY1 535 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 GJA3Q9Y6H8 435 aa8.37□□□□□ -1.07
CTR9-202ENST00000524523 ZNF536O15090 1300 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 RPTORQ8N122 1335 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 GOLGA6L9A6NEM1 432 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 PP2D1A8MPX8 630 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 FAM86B1E9PN63 330 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 ARHGAP6O43182 974 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 PSMD10O75832 226 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 GNA14O95837 355 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 TPM1P09493 284 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 FAM86B2P0C5J1 330 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 DNM2P50570 870 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 PRELPP51888 382 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 ASIC1P78348 528 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 CLDN10P78369 228 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 COG2Q14746 738 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 DBN1Q16643 649 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 CCDC144BQ3MJ40 725 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 USH1GQ495M9 461 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 TBC1D10BQ4KMP7 808 aaPredicted RBP8.36□□□□□ -1.07
CTR9-202ENST00000524523 PRR16Q569H4 304 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 FIGNQ5HY92 759 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 NBPF12Q5TAG4 269 aaPredicted RBP8.36□□□□□ -1.07
CTR9-202ENST00000524523 PCNX4Q63HM2 1172 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 TTI2Q6NXR4 508 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 B3GNT9Q6UX72 402 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 OTOP1Q7RTM1 612 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 TMC6Q7Z403 805 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 FILIP1Q7Z7B0 1213 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 CNGA4Q8IV77 575 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 MB21D1Q8N884 522 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 RDM1Q8NG50 284 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 P2RX5Q93086 422 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 DNAJC19Q96DA6 116 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 ZNF837Q96EG3 531 aaPredicted RBP8.36□□□□□ -1.07
CTR9-202ENST00000524523 MXRA8Q9BRK3 442 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 NUP58Q9BVL2 599 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 GPAMQ9HCL2 828 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 SAMSN1Q9NSI8 373 aaKnown RBP8.36□□□□□ -1.07
CTR9-202ENST00000524523 TBC1D22BQ9NU19 505 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 MAGEC2Q9UBF1 373 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms