RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 KCNF1Q9H3M0 494 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 ADARB2Q9NS39 739 aaKnown RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 BLOC1S4Q9NUP1 217 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 PPP1R9AQ9ULJ8 1098 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 CTDP1Q9Y5B0 961 aaPredicted RBP7.66□□□□□ -1.18
CSMD1-211ENST00000523062 SSC5DA1L4H1 1573 aa7.66□□□□□ -1.18
CSMD1-211ENST00000523062 PVALEFA0A1B0GWK0 134 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 C19orf81C9J6K1 198 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 NRDCO43847 1150 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 ZBED4O75132 1171 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 FLOT1O75955 427 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 DGKGP49619 791 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 HSD17B4P51659 736 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 HIRAP54198 1017 aaPredicted RBP7.65□□□□□ -1.18
CSMD1-211ENST00000523062 STX17P56962 302 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 SETQ01105 290 aaPredicted RBP7.65□□□□□ -1.18
CSMD1-211ENST00000523062 GHRHRQ02643 423 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 SPP2Q13103 211 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 MCM6Q14566 821 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 CCDC144BQ3MJ40 725 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 COBLL1Q53SF7 1204 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 CDKAL1Q5VV42 579 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
CSMD1-211ENST00000523062 UNC13DQ70J99 1090 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 MCF2L2Q86YR7 1114 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 VSTM4Q8IW00 320 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 ADSSL1Q8N142 457 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 GIMAP8Q8ND71 665 aaPredicted RBP7.65□□□□□ -1.18
CSMD1-211ENST00000523062 ANKRD20A12PQ8NF67 263 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 LRRC15Q8TF66 581 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 NOC3LQ8WTT2 800 aaKnown RBP7.65□□□□□ -1.18
CSMD1-211ENST00000523062 NELFBQ8WX92 580 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 LENG9Q96B70 501 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 MED15Q96RN5 788 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 CTAGE1Q96RT6 745 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 RPAP3Q9H6T3 665 aaPredicted RBP7.65□□□□□ -1.18
CSMD1-211ENST00000523062 SLC38A10Q9HBR0 1119 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 MAP3K20Q9NYL2 800 aaKnown RBP7.65□□□□□ -1.18
CSMD1-211ENST00000523062 NRBP1Q9UHY1 535 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 GDAQ9Y2T3 454 aa7.65□□□□□ -1.18
CSMD1-211ENST00000523062 SBF1O95248 1867 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 ZNF536O15090 1300 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 RPTORQ8N122 1335 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 IGLV3-22A0A075B6J6 115 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 A0A1B0GTH6 734 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 BICDL2A1A5D9 508 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 FAM86B1E9PN63 330 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 C2CD2LO14523 706 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 MSH4O15457 936 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 DDNO94850 711 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-211ENST00000523062 FAM86B2P0C5J1 330 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 EPXP11678 715 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 BMP4P12644 408 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 SFPQP23246 707 aaKnown RBP eCLIP7.64□□□□□ -1.19
CSMD1-211ENST00000523062 PRCPP42785 496 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 PDE4DQ08499 809 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 SPIRE1Q08AE8 756 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 FILIP1LQ4L180 1135 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 NKAPLQ5M9Q1 402 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 PRAMEF18Q5VWM3 479 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 C9orf131Q5VYM1 1079 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 NCAPH2Q6IBW4 605 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 KRT26Q7Z3Y9 468 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 FILIP1Q7Z7B0 1213 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 LRRC8AQ8IWT6 810 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 KIAA1524Q8TCG1 905 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 CACTINQ8WUQ7 758 aaKnown RBP7.64□□□□□ -1.19
CSMD1-211ENST00000523062 CLEC4DQ8WXI8 215 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 ZKSCAN4Q969J2 545 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-211ENST00000523062 DCPSQ96C86 337 aaKnown RBP7.64□□□□□ -1.19
CSMD1-211ENST00000523062 DHTKD1Q96HY7 919 aaPredicted RBP7.64□□□□□ -1.19
CSMD1-211ENST00000523062 SYT17Q9BSW7 474 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 SAMSN1Q9NSI8 373 aaKnown RBP7.64□□□□□ -1.19
CSMD1-211ENST00000523062 TMOD4Q9NZQ9 345 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 VAV3Q9UKW4 847 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 PYCARDQ9ULZ3 195 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 ZHX2Q9Y6X8 837 aa7.64□□□□□ -1.19
CSMD1-211ENST00000523062 FRMPD4Q14CM0 1322 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 MYPNQ86TC9 1320 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 MYMKA6NI61 221 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 VWA5AO00534 786 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 NFIBO00712 420 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 PLA2G4BP0C869 781 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 ALAS1P13196 640 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 YBX3P16989 372 aaKnown RBP eCLIP7.63□□□□□ -1.19
CSMD1-211ENST00000523062 RPA1P27694 616 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 STAT3P40763 770 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 OAZ1P54368 228 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 HMGCS2P54868 508 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 LRMPQ12912 555 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 PSMD2Q13200 908 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 CLN3Q13286 438 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 LBRQ14739 615 aaKnown RBP7.63□□□□□ -1.19
CSMD1-211ENST00000523062 CEP55Q53EZ4 464 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 HSP90AA4PQ58FG1 418 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 LRCH2Q5VUJ6 765 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 NIPA1Q7RTP0 329 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 KCNK18Q7Z418 384 aa7.63□□□□□ -1.19
CSMD1-211ENST00000523062 GPBP1Q86WP2 473 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms