RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 KCNB1Q14721 858 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 XKR3Q5GH77 459 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 PRAMEF19Q5SWL8 479 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 TMEM63BQ5T3F8 832 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 GJC2Q5T442 439 aaPredicted RBP14.54□□□□□ -0.08
CPNE3-205ENST00000522240 MAP3K21Q5TCX8 1036 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 PLPPR4Q7Z2D5 763 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 TLK2Q86UE8 772 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 KCNV2Q8TDN2 545 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 PIGOQ8TEQ8 1089 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 STAMQ92783 540 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 ERCC4Q92889 916 aaPredicted RBP14.54□□□□□ -0.08
CPNE3-205ENST00000522240 CCDC47Q96A33 483 aaKnown RBP14.54□□□□□ -0.08
CPNE3-205ENST00000522240 CCDC43Q96MW1 224 aaKnown RBP14.54□□□□□ -0.08
CPNE3-205ENST00000522240 PCYT2Q99447 389 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 GTPBP4Q9BZE4 634 aaKnown RBP14.54□□□□□ -0.08
CPNE3-205ENST00000522240 BMP2KQ9NSY1 1161 aaPredicted RBP14.54□□□□□ -0.08
CPNE3-205ENST00000522240 PPME1Q9Y570 386 aa14.54□□□□□ -0.08
CPNE3-205ENST00000522240 PVALEFA0A1B0GWK0 134 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 OATP04181 439 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 RPN1P04843 607 aaKnown RBP14.53□□□□□ -0.08
CPNE3-205ENST00000522240 SSBP05455 408 aaKnown RBP eCLIP14.53□□□□□ -0.08
CPNE3-205ENST00000522240 CASP1P29466 404 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 STAT5BP51692 787 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 ASIC1P78348 528 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 DHX8Q14562 1220 aaKnown RBP14.53□□□□□ -0.08
CPNE3-205ENST00000522240 PRPF38BQ5VTL8 546 aaKnown RBP14.53□□□□□ -0.08
CPNE3-205ENST00000522240 UNC13DQ70J99 1090 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 OTUD6AQ7L8S5 288 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 TRPV1Q8NER1 839 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 AFG1LQ8WV93 481 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 DDX12PQ92771 950 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 DNAJC19Q96DA6 116 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 PHF12Q96QT6 1004 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 TIPINQ9BVW5 301 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 BLZF1Q9H2G9 400 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 TSPY26PQ9H489 355 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 SMARCAD1Q9H4L7 1026 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 ANO10Q9NW15 660 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 MAN1B1Q9UKM7 699 aa14.53□□□□□ -0.08
CPNE3-205ENST00000522240 FRMD3A2A2Y4 597 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 A6NJR5 290 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 SEPT4O43236 478 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 KLRC4O43908 158 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 DUSP11O75319 330 aaKnown RBP14.52□□□□□ -0.09
CPNE3-205ENST00000522240 PPFIA4O75335 1185 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 RHOBTB3O94955 611 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 STBD1O95210 358 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 CAVIN2O95810 425 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 LGALS2P05162 132 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 ELNP15502 786 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 GUCY2CP25092 1073 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 NLRP12P59046 1061 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 NKX3-2P78367 333 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 CACNB2Q08289 660 aaPredicted RBP14.52□□□□□ -0.09
CPNE3-205ENST00000522240 MORC3Q14149 939 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 RINT1Q6NUQ1 792 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 ANO5Q75V66 913 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 EXOC1Q9NV70 894 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 ODF2LQ9ULJ1 636 aa14.52□□□□□ -0.09
CPNE3-205ENST00000522240 ATP4AP20648 1035 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 CPT1AP50416 773 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 EHHADHQ08426 723 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 DGKDQ16760 1214 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 BRDTQ58F21 947 aaPredicted RBP14.51□□□□□ -0.09
CPNE3-205ENST00000522240 ARSHQ5FYA8 562 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 C1orf186Q6ZWK4 172 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 CCDC65Q8IXS2 484 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 ATP8B4Q8TF62 1192 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 GLG1Q92896 1179 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 RUSC1Q9BVN2 902 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 NIFKQ9BYG3 293 aaKnown RBP14.51□□□□□ -0.09
CPNE3-205ENST00000522240 AP5M1Q9H0R1 490 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 UPF3AQ9H1J1 476 aaKnown RBP14.51□□□□□ -0.09
CPNE3-205ENST00000522240 ERAP1Q9NZ08 941 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 SEPT9Q9UHD8 586 aaPredicted RBP14.51□□□□□ -0.09
CPNE3-205ENST00000522240 ZNF215Q9UL58 517 aaPredicted RBP14.51□□□□□ -0.09
CPNE3-205ENST00000522240 TRIM17Q9Y577 477 aa14.51□□□□□ -0.09
CPNE3-205ENST00000522240 FRMPD3Q5JV73 1810 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 BIN1O00499 593 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 ZBTB39O15060 712 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 DYNC1LI2O43237 492 aaPredicted RBP14.5□□□□□ -0.09
CPNE3-205ENST00000522240 TBCAO75347 108 aaKnown RBP14.5□□□□□ -0.09
CPNE3-205ENST00000522240 KRT18P05783 430 aaKnown RBP14.5□□□□□ -0.09
CPNE3-205ENST00000522240 PTGS1P23219 599 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 GRK4P32298 578 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 GJA9P57773 515 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 TRIM32Q13049 653 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 GIT2Q14161 759 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 KMT5BQ4FZB7 885 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 XKR9Q5GH70 373 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 UTP14CQ5TAP6 766 aaKnown RBP14.5□□□□□ -0.09
CPNE3-205ENST00000522240 PLA2G4FQ68DD2 849 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 FBXO46Q6PJ61 603 aaPredicted RBP14.5□□□□□ -0.09
CPNE3-205ENST00000522240 PADI6Q6TGC4 694 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 DYMQ7RTS9 669 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 TRIM50Q86XT4 487 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 REEP2Q9BRK0 252 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 CYP26B1Q9NR63 512 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 NRBP2Q9NSY0 501 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms