RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 RHOQP17081 205 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 CNGA1P29973 690 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 ZNF76P36508 570 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 TOB1P50616 345 aaPredicted RBP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 SETQ01105 290 aaPredicted RBP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 SEMA3FQ13275 785 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 ORC2Q13416 577 aaPredicted RBP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 LY6KQ17RY6 165 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 LETM2Q2VYF4 491 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 RILPL1Q5EBL4 403 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 TMEM63BQ5T3F8 832 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 MCTP1Q6DN14 999 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 LYSMD3Q7Z3D4 306 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 PRICKLE2Q7Z3G6 844 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 TRAIPQ9BWF2 469 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 RNF208Q9H0X6 261 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 ZSCAN16Q9H4T2 348 aaPredicted RBP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 CUEDC1Q9NWM3 386 aaPredicted RBP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 DDX20Q9UHI6 824 aaKnown RBP9.46□□□□□ -0.9
VPS13B-210ENST00000521932 MRVI1Q9Y6F6 885 aa9.46□□□□□ -0.9
VPS13B-210ENST00000521932 VPS37CA5D8V6 355 aaPredicted RBP9.45□□□□□ -0.9
VPS13B-210ENST00000521932 TBX3O15119 743 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 DHX15O43143 795 aaKnown RBP9.45□□□□□ -0.9
VPS13B-210ENST00000521932 ATP9AO75110 1047 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 BRD1O95696 1058 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 GJB1P08034 283 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 ZSCAN22P10073 491 aaPredicted RBP9.45□□□□□ -0.9
VPS13B-210ENST00000521932 RARBP10826 455 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 KCNA2P16389 499 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 RESTQ13127 1097 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 PKP1Q13835 747 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 NEDD9Q14511 834 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 PRR16Q569H4 304 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 CELF3Q5SZQ8 465 aaKnown RBP9.45□□□□□ -0.9
VPS13B-210ENST00000521932 PLA2G4DQ86XP0 818 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 GIMAP8Q8ND71 665 aaPredicted RBP9.45□□□□□ -0.9
VPS13B-210ENST00000521932 ZNF592Q92610 1267 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 AGO4Q9HCK5 861 aaKnown RBP9.45□□□□□ -0.9
VPS13B-210ENST00000521932 KCNMB3Q9NPA1 279 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 DDX25Q9UHL0 483 aaKnown RBP9.45□□□□□ -0.9
VPS13B-210ENST00000521932 OGDHLQ9ULD0 1010 aa9.45□□□□□ -0.9
VPS13B-210ENST00000521932 NOL7Q9UMY1 257 aaKnown RBP9.45□□□□□ -0.9
VPS13B-210ENST00000521932 MCM3APO60318 1980 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 IPO5O00410 1097 aaKnown RBP9.44□□□□□ -0.9
VPS13B-210ENST00000521932 MSH4O15457 936 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 ADAMTS4O75173 837 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 SGPL1O95470 568 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 TDP2O95551 362 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 UBA1P22314 1058 aaKnown RBP9.44□□□□□ -0.9
VPS13B-210ENST00000521932 SOX11P35716 441 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 GJA8P48165 433 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 GJA9P57773 515 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 CLN3Q13286 438 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 LAMC2Q13753 1193 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 RNFT1Q5M7Z0 435 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 METTL7BQ6UX53 244 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 CYP2U1Q7Z449 544 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 FERMT3Q86UX7 667 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 ETNPPLQ8TBG4 499 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 FAM20AQ96MK3 541 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 IPO9Q96P70 1041 aaKnown RBP9.44□□□□□ -0.9
VPS13B-210ENST00000521932 DEFB118Q96PH6 123 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 MTMR9Q96QG7 549 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 RIT2Q99578 217 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 ZNF577Q9BSK1 485 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 UPF3AQ9H1J1 476 aaKnown RBP9.44□□□□□ -0.9
VPS13B-210ENST00000521932 ALG2Q9H553 416 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 RAB6BQ9NRW1 208 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 TBC1D22BQ9NU19 505 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 ZDHHC9Q9Y397 364 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 NFASCO94856 1347 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 MYH7BA7E2Y1 1941 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 KIAA1217Q5T5P2 1943 aa9.44□□□□□ -0.9
VPS13B-210ENST00000521932 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 CTAGE5O15320 804 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 DYNC1LI2O43237 492 aaPredicted RBP9.43□□□□□ -0.9
VPS13B-210ENST00000521932 SLC37A4O43826 429 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 PSMD10O75832 226 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 FARP2O94887 1054 aaPredicted RBP9.43□□□□□ -0.9
VPS13B-210ENST00000521932 STAU1O95793 577 aaKnown RBP9.43□□□□□ -0.9
VPS13B-210ENST00000521932 F13A1P00488 732 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 GH1P01241 217 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 CST5P28325 142 aaPredicted RBP9.43□□□□□ -0.9
VPS13B-210ENST00000521932 NUCB2P80303 420 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 ARHGAP1Q07960 439 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 ITGB3BPQ13352 177 aaPredicted RBP9.43□□□□□ -0.9
VPS13B-210ENST00000521932 TTC38Q5R3I4 469 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 GJC2Q5T442 439 aaPredicted RBP9.43□□□□□ -0.9
VPS13B-210ENST00000521932 ANO1Q5XXA6 986 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 CCSAPQ6IQ19 270 aaPredicted RBP9.43□□□□□ -0.9
VPS13B-210ENST00000521932 B3GNT9Q6UX72 402 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 CYFIP1Q7L576 1253 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 TLK2Q86UE8 772 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 DHX37Q8IY37 1157 aaKnown RBP9.43□□□□□ -0.9
VPS13B-210ENST00000521932 SLFN12Q8IYM2 578 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 VWA5B2Q8N398 1253 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 C4orf32Q8N8J7 132 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 KLHDC9Q8NEP7 349 aa9.43□□□□□ -0.9
VPS13B-210ENST00000521932 U2AF1L4Q8WU68 220 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms