RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 PCBP1Q15365 356 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINC00535-204ENST00000520513 CDSNQ15517 529 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 SMAD2Q15796 467 aaKnown RBP7.08□□□□□ -1.28
LINC00535-204ENST00000520513 ABHD17CQ6PCB6 329 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 DDX42Q86XP3 938 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINC00535-204ENST00000520513 UBR7Q8N806 425 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 MEGF9Q9H1U4 602 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 CD248Q9HCU0 757 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 SLC39A2Q9NP94 309 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 DDX56Q9NY93 547 aaKnown RBP7.08□□□□□ -1.28
LINC00535-204ENST00000520513 FTSJ1Q9UET6 329 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 ADAM29Q9UKF5 820 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 ZDHHC9Q9Y397 364 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 NUB1Q9Y5A7 615 aa7.08□□□□□ -1.28
LINC00535-204ENST00000520513 ZEB2O60315 1214 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 B4GALT4O60513 344 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 GLRX3O76003 335 aaKnown RBP7.07□□□□□ -1.28
LINC00535-204ENST00000520513 EYA4O95677 639 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 PYGMP11217 842 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 SCNN1BP51168 640 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 EPHB4P54760 987 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 ARHGAP44Q17R89 818 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 TMEM177Q53S58 311 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 FSTL4Q6MZW2 842 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 ARHGAP36Q6ZRI8 547 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 OSTM1Q86WC4 334 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 IGSF22Q8N9C0 903 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 PRPF38AQ8NAV1 312 aaKnown RBP7.07□□□□□ -1.28
LINC00535-204ENST00000520513 CHST14Q8NCH0 376 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 CHST13Q8NET6 341 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 ATL2Q8NHH9 583 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 TACO1Q9BSH4 297 aaKnown RBP7.07□□□□□ -1.28
LINC00535-204ENST00000520513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC00535-204ENST00000520513 HOMER2Q9NSB8 354 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 SRPK3Q9UPE1 567 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 PTPN22Q9Y2R2 807 aa7.07□□□□□ -1.28
LINC00535-204ENST00000520513 CCDC66A2RUB6 948 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 KCNK3O14649 394 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 RAB11FIP3O75154 756 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 CNOT4O95628 575 aaKnown RBP7.06□□□□□ -1.28
LINC00535-204ENST00000520513 F2P00734 622 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 SRGAP2CP0DJJ0 459 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 PDE6AP16499 860 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 JAM2P57087 298 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 PPP2CBP62714 309 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 PPP2CAP67775 309 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 SART3Q15020 963 aaKnown RBP7.06□□□□□ -1.28
LINC00535-204ENST00000520513 SEC23AQ15436 765 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 SEPT7Q16181 437 aaKnown RBP7.06□□□□□ -1.28
LINC00535-204ENST00000520513 CRY1Q16526 586 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 Q6ZUG5 572 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 GPR155Q7Z3F1 870 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 NECAB2Q7Z6G3 386 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 PTRH1Q86Y79 214 aaKnown RBP7.06□□□□□ -1.28
LINC00535-204ENST00000520513 DNERQ8NFT8 737 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 USP7Q93009 1102 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 TTC1Q99614 292 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 TMPRSS5Q9H3S3 457 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 IFT22Q9H7X7 185 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 ARHGAP20Q9P2F6 1191 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 B4GALT6Q9UBX8 382 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 APOBEC2Q9Y235 224 aaKnown RBP7.06□□□□□ -1.28
LINC00535-204ENST00000520513 ZKSCAN5Q9Y2L8 839 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 COQ6Q9Y2Z9 468 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 RB1CC1Q8TDY2 1594 aa7.06□□□□□ -1.28
LINC00535-204ENST00000520513 M0R2C6 588 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 MATN3O15232 486 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 GAS7O60861 476 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 ENO2P09104 434 aaPredicted RBP7.05□□□□□ -1.28
LINC00535-204ENST00000520513 BPIP17213 487 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 PTPN1P18031 435 aaKnown RBP7.05□□□□□ -1.28
LINC00535-204ENST00000520513 TNFRSF1AP19438 455 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 CSF2RBP32927 897 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 CDKN1CP49918 316 aaPredicted RBP7.05□□□□□ -1.28
LINC00535-204ENST00000520513 MECP2P51608 486 aaKnown RBP7.05□□□□□ -1.28
LINC00535-204ENST00000520513 LACTBP83111 547 aaPredicted RBP7.05□□□□□ -1.28
LINC00535-204ENST00000520513 OCRLQ01968 901 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 DBPQ10586 325 aaPredicted RBP7.05□□□□□ -1.28
LINC00535-204ENST00000520513 STRN3Q13033 797 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 RNF219Q5W0B1 726 aaPredicted RBP7.05□□□□□ -1.28
LINC00535-204ENST00000520513 OVCH1Q7RTY7 1134 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 DVL3Q92997 716 aaPredicted RBP7.05□□□□□ -1.28
LINC00535-204ENST00000520513 BARX1Q9HBU1 254 aaPredicted RBP7.05□□□□□ -1.28
LINC00535-204ENST00000520513 SMURF1Q9HCE7 757 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 CATSPERZQ9NTU4 200 aa7.05□□□□□ -1.28
LINC00535-204ENST00000520513 BICRAQ9NZM4 1560 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 ZNF561-AS1K7EIQ3 104 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 CHGBP05060 677 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 PDGFRBP09619 1106 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 ZNF888P0CJ79 500 aaPredicted RBP7.04□□□□□ -1.28
LINC00535-204ENST00000520513 DNM2P50570 870 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 DSG1Q02413 1049 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 GPR19Q15760 415 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 BTBD8Q5XKL5 378 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 OTOP1Q7RTM1 612 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 STRA8Q7Z7C7 330 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 WDR66Q8TBY9 1149 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 AJUBAQ96IF1 538 aa7.04□□□□□ -1.28
LINC00535-204ENST00000520513 CEP89Q96ST8 783 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms