RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PDGFBP01127 241 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 LAG3P18627 525 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 NBL1P41271 181 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 TECP42680 631 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 SLC26A2P50443 739 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 STAT5BP51692 787 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 ACTR2P61160 394 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 ODR4Q5SWX8 454 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 FAM102BQ5T8I3 360 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 MTHFD1LQ6UB35 978 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 ASCL5Q7RTU5 278 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 ZBTB33Q86T24 672 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 ZNF654Q8IZM8 581 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 KREMEN2Q8NCW0 462 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 MRPS27Q92552 414 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 ADAM2Q99965 735 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 RWDD1Q9H446 243 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 CWH43Q9H720 699 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 NGRNQ9NPE2 291 aaKnown RBP14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 NR2E1Q9Y466 385 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 CACNA1AO00555 2505 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 NFASCO94856 1347 aa14.13□□□□□ -0.15
TRAPPC9-204ENST00000518723 PLXNA3P51805 1871 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 DENND3A2RUS2 1198 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 PRR23AA6NEV1 266 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 SPDYE3A6NKU9 549 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 RPS6KA5O75582 802 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 GNAQP50148 359 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 ANTXR2P58335 489 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 FAM189BP81408 668 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 MTMR3Q13615 1198 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 UBE2SQ16763 222 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 PLPP4Q5VZY2 271 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 TMEM40Q8WWA1 233 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 ELAC1Q9H777 363 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 LY9Q9HBG7 655 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 KCNH7Q9NS40 1196 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 TMEM161AQ9NX61 479 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 HCSTQ9UBK5 93 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 PUF60Q9UHX1 559 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 PCDHA6Q9UN73 950 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 ST3GAL5Q9UNP4 418 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 SORCS3Q9UPU3 1222 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 NOC2LQ9Y3T9 749 aaKnown RBP14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 PCDHA8Q9Y5H6 950 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 TAF6LQ9Y6J9 622 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 DCHS1Q96JQ0 3298 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 WDR87Q6ZQQ6 2873 aa14.12□□□□□ -0.15
TRAPPC9-204ENST00000518723 IGKV6D-21A0A0A0MT36 114 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 GPR182O15218 404 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 ATG7O95352 703 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 KLRC1P26715 233 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 MB21D2Q8IYB1 491 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 KIAA0319LQ8IZA0 1049 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 SRBD1Q8N5C6 995 aaKnown RBP14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 NECTIN4Q96NY8 510 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 TCF25Q9BQ70 676 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 MXRA8Q9BRK3 442 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 SDF4Q9BRK5 362 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 MTA3Q9BTC8 594 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 MYL10Q9BUA6 226 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 ATP6V0A4Q9HBG4 840 aa14.11□□□□□ -0.15
TRAPPC9-204ENST00000518723 HIDE1A8MVS5 230 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 HBP1O60381 514 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 PLEKHA8P1O95397 391 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 BRD1O95696 1058 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 FGFR1P11362 822 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 IBSPP21815 317 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 PDE4AP27815 886 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 PPM1AP35813 382 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 PTH1RQ03431 593 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 ITIH3Q06033 890 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 APOBRQ0VD83 1088 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 TPRNQ4KMQ1 711 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 TEX2Q8IWB9 1127 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 TMEM105Q8N8V8 129 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 CASP10Q92851 521 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 APOL5Q9BWW9 433 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 TMEM117Q9H0C3 514 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 CDHR5Q9HBB8 845 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 ENTPD7Q9NQZ7 604 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 GINS2Q9Y248 185 aa14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 FNDC1Q4ZHG4 1894 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC9-204ENST00000518723 COL1A2P08123 1366 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 HOXA2O43364 376 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 IGHDP01880 384 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 SP100P23497 879 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 CRYBB1P53674 252 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 ITGB3BPQ13352 177 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 DSC3Q14574 896 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 LLGL2Q6P1M3 1020 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 KCNT2Q6UVM3 1135 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 ERMP1Q7Z2K6 904 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 FAM228AQ86W67 206 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 CYP2W1Q8TAV3 490 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 RUFY2Q8WXA3 655 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 ZNF558Q96NG5 402 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 ADAM7Q9H2U9 754 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 POMKQ9H5K3 350 aa14.09□□□□□ -0.15
TRAPPC9-204ENST00000518723 TSHZ2Q9NRE2 1034 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms