RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 SPTLC2O15270 562 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 HBP1O60381 514 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PQBP1O60828 265 aaKnown RBP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 YEATS4O95619 227 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SMIM10L2AP0DMW4 78 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SMIM10L2BP0DMW5 78 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 NCLP19338 710 aaKnown RBP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PTMSP20962 102 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 MUTP22033 750 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 MARCKSP29966 332 aaPredicted RBP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 NASPP49321 788 aaPredicted RBP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CDK7P50613 346 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 RTP1P59025 263 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 KRT85P78386 507 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 DNM1Q05193 864 aaKnown RBP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PPFIA1Q13136 1202 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SNX17Q15036 470 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PLCB4Q15147 1175 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PTPAQ15257 358 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 LRRC26Q2I0M4 334 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 KRT79Q5XKE5 535 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 TRMT1LQ7Z2T5 733 aaKnown RBP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 ANKRD33Q7Z3H0 272 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SESTD1Q86VW0 696 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 TPH2Q8IWU9 490 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 IGSF22Q8N9C0 903 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 ATP8B4Q8TF62 1192 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 DPF3Q92784 378 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 AK8Q96MA6 479 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 EIF2AK1Q9BQI3 630 aaKnown RBP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 POLR3CQ9BUI4 534 aaPredicted RBP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 FTOQ9C0B1 505 aaKnown RBP eCLIP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 RNPEPQ9H4A4 650 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 ZSWIM4Q9H7M6 989 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 TUFT1Q9NNX1 390 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 HDAC6Q9UBN7 1215 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 GTF2IRD1Q9UHL9 959 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 NOD1Q9Y239 953 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 ATP11BQ9Y2G3 1177 aa8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 MORC2Q9Y6X9 1032 aaPredicted RBP8.61□□□□□ -1.03
CSGALNACT1-206ENST00000518542 LOXHD1Q8IVV2 1947 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 EVPLQ92817 2033 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 MAP3K7O43318 606 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PPP6R2O75170 966 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SLITRK3O94933 977 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 OATP04181 439 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 INSRRP14616 1297 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 RPA1P27694 616 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 LONP1P36776 959 aaKnown RBP8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CCT6AP40227 531 aaKnown RBP8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PRKCEQ02156 737 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CYP4A11Q02928 519 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 TLE2Q04725 743 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CTTNQ14247 550 aaKnown RBP8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 NFKBIBQ15653 356 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 GRIK4Q16099 956 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PTGISQ16647 500 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 UGCGQ16739 394 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 TRIM60Q495X7 471 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 XKR3Q5GH77 459 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 ZNF484Q5JVG2 852 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 OTUD6AQ7L8S5 288 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 C4orf19Q8IY42 314 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 KRI1Q8N9T8 703 aaKnown RBP8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 LINC00301Q8NCQ3 95 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SLC17A8Q8NDX2 589 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 KCNG4Q8TDN1 519 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 DYDC2Q96IM9 177 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CDK5RAP3Q96JB5 506 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CCDC43Q96MW1 224 aaKnown RBP8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 HSD17B14Q9BPX1 270 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 LXNQ9BS40 222 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 ADAM33Q9BZ11 813 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SCAND2PQ9GZW5 306 aaPredicted RBP8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 RGL1Q9NZL6 768 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PRKAG2Q9UGJ0 569 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SRPRBQ9Y5M8 271 aaKnown RBP8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 COL1A2P08123 1366 aa8.6□□□□□ -1.03
CSGALNACT1-206ENST00000518542 COL6A3P12111 3177 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 KDM3AQ9Y4C1 1321 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SLC26A4O43511 780 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 ZNF862O60290 1169 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 B4GALT4O60513 344 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 LYPLA2O95372 231 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CLTBP09497 229 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 ATP4AP20648 1035 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 TXLNAP40222 546 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 UBA7P41226 1012 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 ME1P48163 572 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 IGBP1P78318 339 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 IL17AQ16552 155 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 GDF6Q6KF10 455 aaPredicted RBP8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CATSPER3Q86XQ3 398 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 FAM126BQ8IXS8 530 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 EXOC8Q8IYI6 725 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 CCDC155Q8N6L0 562 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 RASSF8Q8NHQ8 419 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 SNX29Q8TEQ0 813 aa8.59□□□□□ -1.03
CSGALNACT1-206ENST00000518542 PPP1R13LQ8WUF5 828 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms