RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 ZSCAN23Q3MJ62 389 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 GNASQ5JWF2 1037 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 TMEM63BQ5T3F8 832 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 KCNK18Q7Z418 384 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 RNF180Q86T96 592 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 PCSK9Q8NBP7 692 aaKnown RBP12.08□□□□□ -0.48
PFDN1-204ENST00000512707 ATP8B4Q8TF62 1192 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 CEP170P1Q96L14 293 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 JPH2Q9BR39 696 aaPredicted RBP12.08□□□□□ -0.48
PFDN1-204ENST00000512707 TIPINQ9BVW5 301 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 GZF1Q9H116 711 aaPredicted RBP12.08□□□□□ -0.48
PFDN1-204ENST00000512707 UPF3AQ9H1J1 476 aaKnown RBP12.08□□□□□ -0.48
PFDN1-204ENST00000512707 SYNRGQ9UMZ2 1314 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 H3BRB1 525 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 ADCY6O43306 1168 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 HBP1O60381 514 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 MARK3P27448 753 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 RFC5P40937 340 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 RARRES1P49788 294 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 SLC12A3P55017 1021 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 PSMC6P62333 389 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 PNOCQ13519 176 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 PADI6Q6TGC4 694 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 TRMT1LQ7Z2T5 733 aaKnown RBP12.07□□□□□ -0.48
PFDN1-204ENST00000512707 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 CCDC65Q8IXS2 484 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 GRAMD1CQ8IYS0 662 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 SH3TC2Q8TF17 1288 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 LENG1Q96BZ8 264 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-204ENST00000512707 GSDMAQ96QA5 445 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 C7orf25Q9BPX7 421 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 TRIM9Q9C026 710 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.07□□□□□ -0.48
PFDN1-204ENST00000512707 TUT1Q9H6E5 874 aaKnown RBP12.07□□□□□ -0.48
PFDN1-204ENST00000512707 EXOC1Q9NV70 894 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 KIAA1468Q9P260 1216 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 WRAP73Q9P2S5 460 aaPredicted RBP12.07□□□□□ -0.48
PFDN1-204ENST00000512707 LOXHD1Q8IVV2 1947 aa12.07□□□□□ -0.48
PFDN1-204ENST00000512707 DOCK5Q9H7D0 1870 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 PVALEFA0A1B0GWK0 134 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 SYCE3A1L190 88 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 ZNF862O60290 1169 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 DGAT1O75907 488 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 RPN1P04843 607 aaKnown RBP12.06□□□□□ -0.48
PFDN1-204ENST00000512707 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 CCDC192P0DO97 292 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 IDEP14735 1019 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 CST5P28325 142 aaPredicted RBP12.06□□□□□ -0.48
PFDN1-204ENST00000512707 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
PFDN1-204ENST00000512707 POLGP54098 1239 aaPredicted RBP12.06□□□□□ -0.48
PFDN1-204ENST00000512707 NKX3-2P78367 333 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 DPYDQ12882 1025 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 MTERF2Q49AM1 385 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 ZNF484Q5JVG2 852 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 CNNM4Q6P4Q7 775 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 ANO5Q75V66 913 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 TRIM50Q86XT4 487 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 TRIML1Q8N9V2 468 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 ARRDC4Q8NCT1 418 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 MCPH1Q8NEM0 835 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 DDX12PQ92771 950 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 STAMQ92783 540 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 DRC1Q96MC2 740 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 PCYT2Q99447 389 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 MTG1Q9BT17 334 aaPredicted RBP12.06□□□□□ -0.48
PFDN1-204ENST00000512707 NIFKQ9BYG3 293 aaKnown RBP12.06□□□□□ -0.48
PFDN1-204ENST00000512707 BLZF1Q9H2G9 400 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 ATP6V0A4Q9HBG4 840 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 CYP26B1Q9NR63 512 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 ODF2LQ9ULJ1 636 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 TELO2Q9Y4R8 837 aa12.06□□□□□ -0.48
PFDN1-204ENST00000512707 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
PFDN1-204ENST00000512707 COL1A2P08123 1366 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 MYMKA6NI61 221 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 KBTBD13C9JR72 458 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 PITPNM1O00562 1244 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 GAS2O43903 313 aaKnown RBP12.05□□□□□ -0.48
PFDN1-204ENST00000512707 USO1O60763 962 aaKnown RBP12.05□□□□□ -0.48
PFDN1-204ENST00000512707 CABYRO75952 493 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 FAM13AO94988 1023 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 PGK1P00558 417 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 F2P00734 622 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 GAP43P17677 238 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 CYP11B2P19099 503 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 GUCY2CP25092 1073 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 CHMP4BP1P59074 171 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 MDM2Q00987 491 aaPredicted RBP12.05□□□□□ -0.48
PFDN1-204ENST00000512707 BEX3Q00994 111 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 TBC1D8BQ0IIM8 1120 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 CUL4BQ13620 913 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 PLCB4Q15147 1175 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 STX1AQ16623 288 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 PLA2G4FQ68DD2 849 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 RINT1Q6NUQ1 792 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 RBM43Q6ZSC3 357 aaKnown RBP12.05□□□□□ -0.48
PFDN1-204ENST00000512707 DYMQ7RTS9 669 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 HS6ST3Q8IZP7 471 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 RETREG2Q8NC44 543 aa12.05□□□□□ -0.48
PFDN1-204ENST00000512707 C16orf70Q9BSU1 422 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms