RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 DSPP15924 2871 aaKnown RBP12.57□□□□□ -0.4
SNF8-207ENST00000509995 MBLAC1A4D2B0 266 aaPredicted RBP12.56□□□□□ -0.4
SNF8-207ENST00000509995 LAMTOR5O43504 91 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 TBC1D4O60343 1298 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 LILRB5O75023 590 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 RPLP2P05387 115 aaKnown RBP12.56□□□□□ -0.4
SNF8-207ENST00000509995 EPCAMP16422 314 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 KRT17Q04695 432 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 PPFIA1Q13136 1202 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 NONOQ15233 471 aaKnown RBP eCLIP12.56□□□□□ -0.4
SNF8-207ENST00000509995 KCNT2Q6UVM3 1135 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 GPR149Q86SP6 731 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 VSIG10LQ86VR7 867 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 KBTBD3Q8NAB2 608 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 IL31RAQ8NI17 732 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 DDX1Q92499 740 aaKnown RBP12.56□□□□□ -0.4
SNF8-207ENST00000509995 CPVLQ9H3G5 476 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 ZSCAN32Q9NX65 697 aa12.56□□□□□ -0.4
SNF8-207ENST00000509995 RNF113AO15541 343 aaKnown RBP12.55□□□□□ -0.4
SNF8-207ENST00000509995 N4BP1O75113 896 aaKnown RBP12.55□□□□□ -0.4
SNF8-207ENST00000509995 LRRN2O75325 713 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 CFBP00751 764 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 PBX3P40426 434 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 HSD17B4P51659 736 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 CTDSPL2Q05D32 466 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 SPEM2Q0P670 501 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 PGM5Q15124 567 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 GRIK4Q16099 956 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 UTP14CQ5TAP6 766 aaKnown RBP12.55□□□□□ -0.4
SNF8-207ENST00000509995 N4BP2L1Q5TBK1 243 aaPredicted RBP12.55□□□□□ -0.4
SNF8-207ENST00000509995 IER5Q5VY09 327 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 CYFIP1Q7L576 1253 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 ITPRIPQ8IWB1 547 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 NELL1Q92832 810 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 ZNF558Q96NG5 402 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 SFXN1Q9H9B4 322 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 SPATA6Q9NWH7 488 aaPredicted RBP12.55□□□□□ -0.4
SNF8-207ENST00000509995 MRPL11Q9Y3B7 192 aaKnown RBP12.55□□□□□ -0.4
SNF8-207ENST00000509995 TRPV2Q9Y5S1 764 aa12.55□□□□□ -0.4
SNF8-207ENST00000509995 DMXL2Q8TDJ6 3036 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 LAMA4Q16363 1823 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 M0QZ92 97 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 MGEA5O60502 916 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 CA8P35219 290 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 GHRHRQ02643 423 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 CSTF1Q05048 431 aaKnown RBP12.54□□□□□ -0.4
SNF8-207ENST00000509995 LETM2Q2VYF4 491 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 MARCH8Q5T0T0 291 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
SNF8-207ENST00000509995 ZKSCAN2Q63HK3 967 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 UNQ6494/PRO21346Q6UXR6 183 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 STOX1Q6ZVD7 989 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 CABP7Q86V35 215 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 SLC44A3Q8N4M1 653 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
SNF8-207ENST00000509995 FAM49AQ9H0Q0 323 aaPredicted RBP12.54□□□□□ -0.4
SNF8-207ENST00000509995 TELO2Q9Y4R8 837 aa12.54□□□□□ -0.4
SNF8-207ENST00000509995 MYH15Q9Y2K3 1946 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.53□□□□□ -0.4
SNF8-207ENST00000509995 C1QTNF9BB2RNN3 333 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 OPLAHO14841 1288 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 ANP32CO43423 234 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 ORC4O43929 436 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 LRP3O75074 770 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
SNF8-207ENST00000509995 C1QTNF9P0C862 333 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 GOLGA8HP0CJ92 632 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 FGFR1P11362 822 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 CCND2P30279 289 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 TMEM62Q0P6H9 643 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 NEDD9Q14511 834 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 PTPN14Q15678 1187 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 TMEM266Q2M3C6 531 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 LRSAM1Q6UWE0 723 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 LRRC55Q6ZSA7 311 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 KDF1Q8NAX2 398 aaPredicted RBP12.53□□□□□ -0.4
SNF8-207ENST00000509995 GLG1Q92896 1179 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 BCO2Q9BYV7 579 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 UBA5Q9GZZ9 404 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 C1orf112Q9NSG2 853 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 SPG21Q9NZD8 308 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 COL4A3Q01955 1670 aa12.53□□□□□ -0.4
SNF8-207ENST00000509995 HELZ2Q9BYK8 2649 aaKnown RBP12.52□□□□□ -0.4
SNF8-207ENST00000509995 DENND3A2RUS2 1198 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 C9IYK1 514 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 STARD6P59095 220 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 NFX1Q12986 1120 aaKnown RBP12.52□□□□□ -0.41
SNF8-207ENST00000509995 BMS1Q14692 1282 aaKnown RBP12.52□□□□□ -0.41
SNF8-207ENST00000509995 QRICH1Q2TAL8 776 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 SLC24A5Q71RS6 500 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 LRRC43Q8N309 656 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 SLC22A17Q8WUG5 538 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 NXPE3Q969Y0 559 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 ZBTB10Q96DT7 871 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 ADAM2Q99965 735 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 TMEM117Q9H0C3 514 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.41
SNF8-207ENST00000509995 RGS18Q9NS28 235 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms