RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 MTMR3Q13615 1198 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 FAM160B1Q5W0V3 765 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 HEATR3Q7Z4Q2 680 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 TMTC2Q8N394 836 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 SUSD6Q92537 303 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 MRPS27Q92552 414 aaKnown RBP11.82□□□□□ -0.52
MBD4-208ENST00000509828 ASIC4Q96FT7 647 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 PPP1R16BQ96T49 567 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 TMX1Q9H3N1 280 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 NGRNQ9NPE2 291 aaKnown RBP11.82□□□□□ -0.52
MBD4-208ENST00000509828 RGS18Q9NS28 235 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 TCEAL9Q9UHQ7 104 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 ST3GAL5Q9UNP4 418 aa11.82□□□□□ -0.52
MBD4-208ENST00000509828 NOC2LQ9Y3T9 749 aaKnown RBP11.82□□□□□ -0.52
MBD4-208ENST00000509828 TECTAO75443 2155 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 KAT6AQ92794 2004 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 hCG_1642624A0A1W2PR95 340 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 DDX39AO00148 427 aaKnown RBP11.81□□□□□ -0.52
MBD4-208ENST00000509828 HOXA2O43364 376 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 GALR2O43603 387 aaPredicted RBP11.81□□□□□ -0.52
MBD4-208ENST00000509828 HBP1O60381 514 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 PDGFBP01127 241 aaPredicted RBP11.81□□□□□ -0.52
MBD4-208ENST00000509828 CALM1P0DP23 149 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 CALM2P0DP24 149 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 CALM3P0DP25 149 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 SLC26A2P50443 739 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 PTH1RQ03431 593 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 TRMT1LQ7Z2T5 733 aaKnown RBP11.81□□□□□ -0.52
MBD4-208ENST00000509828 UBALD2Q8IYN6 164 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 CMTR1Q8N1G2 835 aaKnown RBP11.81□□□□□ -0.52
MBD4-208ENST00000509828 CRIPAKQ8N1N5 446 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 METTL13Q8N6R0 699 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 RNF169Q8NCN4 708 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 VN1R2Q8NFZ6 395 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 CASP10Q92851 521 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 ZNF558Q96NG5 402 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 PCYT2Q99447 389 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 MXRA8Q9BRK3 442 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 ERVK-5Q9HDB9 667 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 KCNH7Q9NS40 1196 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 KDM3AQ9Y4C1 1321 aa11.81□□□□□ -0.52
MBD4-208ENST00000509828 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
MBD4-208ENST00000509828 ZNF318Q5VUA4 2279 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 PRC1O43663 620 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 MGEA5O60502 916 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 PLEKHA8P1O95397 391 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 IGHDP01880 384 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 FGFR1P11362 822 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 ZSCAN20P17040 1043 aaPredicted RBP11.8□□□□□ -0.52
MBD4-208ENST00000509828 PPM1AP35813 382 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 ZNF484Q5JVG2 852 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 PDXDC2PQ6P474 469 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 SYNE3Q6ZMZ3 975 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
MBD4-208ENST00000509828 IGDCC4Q8TDY8 1250 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 NECTIN4Q96NY8 510 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 S1PR5Q9H228 398 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 TMEM161AQ9NX61 479 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 SPG21Q9NZD8 308 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 SORCS3Q9UPU3 1222 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 LZTS1Q9Y250 596 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 TTC3P53804 2025 aa11.8□□□□□ -0.52
MBD4-208ENST00000509828 LAMA4Q16363 1823 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 C9IYK1 514 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 FSCN2O14926 492 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 ARP10275 920 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 RXRAP19793 462 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 PDE4AP27815 886 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 MCM5P33992 734 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 MTHFRP42898 656 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 CRYBB1P53674 252 aaPredicted RBP11.79□□□□□ -0.52
MBD4-208ENST00000509828 NAPAP54920 295 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 PLCB3Q01970 1234 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 SMC1AQ14683 1233 aaKnown RBP11.79□□□□□ -0.52
MBD4-208ENST00000509828 KIZQ2M2Z5 673 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 MIS18BP1Q6P0N0 1132 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 SYCE2Q6PIF2 218 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 KCNT2Q6UVM3 1135 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 TMEM184AQ6ZMB5 413 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 RAB11FIP4Q86YS3 637 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 KIAA0319LQ8IZA0 1049 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 SCLT1Q96NL6 688 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 TMEM117Q9H0C3 514 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 IL25Q9H293 177 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 ZNF302Q9NR11 478 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 HCSTQ9UBK5 93 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 SLC12A7Q9Y666 1083 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 BAZ2BQ9UIF8 2168 aaKnown RBP11.79□□□□□ -0.52
MBD4-208ENST00000509828 NFASCO94856 1347 aa11.79□□□□□ -0.52
MBD4-208ENST00000509828 HIDE1A8MVS5 230 aa11.78□□□□□ -0.52
MBD4-208ENST00000509828 FOSP01100 380 aaPredicted RBP11.78□□□□□ -0.52
MBD4-208ENST00000509828 ANTXR2P58335 489 aa11.78□□□□□ -0.52
MBD4-208ENST00000509828 ITIH3Q06033 890 aa11.78□□□□□ -0.52
MBD4-208ENST00000509828 CEP55Q53EZ4 464 aa11.78□□□□□ -0.52
MBD4-208ENST00000509828 ATAT1Q5SQI0 421 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms