RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 GDF10P55107 478 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 KRT85P78386 507 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 GALNT1Q10472 559 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 NAA25Q14CX7 972 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 TEAD4Q15561 434 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 PKN1Q16512 942 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 ODF2Q5BJF6 829 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 RPS26P11Q5JNZ5 115 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 IZUMO3Q5VZ72 239 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 PLEKHM3Q6ZWE6 761 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 CCDC84Q86UT8 332 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 TNIP2Q8NFZ5 429 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 GAS2L1Q99501 681 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 EYA3Q99504 573 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 SORBS1Q9BX66 1292 aaKnown RBP8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 CARD14Q9BXL6 1004 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 EDEM3Q9BZQ6 932 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 SLC52A2Q9HAB3 445 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 DONSONQ9NYP3 566 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 ORC3Q9UBD5 711 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 RASAL2Q9UJF2 1139 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 JRKLQ9Y4A0 524 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 MRFAP1Q9Y605 127 aa8.29□□□□□ -1.08
PDGFRA-206ENST00000508170 RNF123Q5XPI4 1314 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 LTBP3Q9NS15 1303 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 GPR75-ASB3A0A0A6YYF3 556 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 PITPNM1O00562 1244 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 TXNL1O43396 289 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 ASLP04424 464 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 PDHA1P08559 390 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 ZBTB48P10074 688 aaPredicted RBP8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 CYP2A6P11509 494 aaPredicted RBP8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 IL11P20809 199 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 ATP5OP48047 213 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 SCNN1BP51168 640 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 CUL4AQ13619 759 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 SSPNQ14714 243 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 MCTP1Q6DN14 999 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 IL27RAQ6UWB1 636 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 CYP2U1Q7Z449 544 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 SPATA2LQ8IUW3 424 aaPredicted RBP8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 REXO1Q8N1G1 1221 aaKnown RBP8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 ANKRD35Q8N283 1001 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 ZNF527Q8NB42 609 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 FATE1Q969F0 183 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 IFT43Q96FT9 208 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 RUNDC3BQ96NL0 473 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 CAPS2Q9BXY5 557 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 EPN3Q9H201 632 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 MAGEH1Q9H213 219 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 ZC3H7BQ9UGR2 993 aaKnown RBP8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 NDOR1Q9UHB4 597 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 MOSPD1Q9UJG1 213 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 ERCC6Q03468 1493 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 LAMC3Q9Y6N6 1575 aa8.28□□□□□ -1.08
PDGFRA-206ENST00000508170 CYP2D7A0A087X1C5 515 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 FAM227AF5H4B4 570 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 G3V3G9 751 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 RIPK2O43353 540 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 EPN2O95208 641 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 STAMBPO95630 424 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 TOP1P11387 765 aaKnown RBP8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 TMEM11P17152 192 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 TGFB2P61812 414 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 CCNA1P78396 465 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 FOXK2Q01167 660 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 NRG1Q02297 640 aaPredicted RBP8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 SURF1Q15526 300 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 PTPRNQ16849 979 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 ZNF674Q2M3X9 581 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 FAM209BQ5JX69 171 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 ANGPTL8Q6UXH0 198 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 ZNF783Q6ZMS7 281 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 SV2BQ7L1I2 683 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 UNC45BQ8IWX7 931 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 KRT78Q8N1N4 520 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 ZBTB44Q8NCP5 570 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 OTUD7AQ8TE49 926 aaPredicted RBP8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 HTRA1Q92743 480 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 FNBP1Q96RU3 617 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 WDR24Q96S15 920 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 MMTAG2Q9BU76 263 aaKnown RBP8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 C14orf119Q9NWQ9 140 aa8.27□□□□□ -1.08
PDGFRA-206ENST00000508170 PDS5BQ9NTI5 1447 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 A0A1W2PQU0 124 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 THAP12O43422 761 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 CSPG5O95196 566 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 CFBP00751 764 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 PSAPP07602 524 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 PORP16435 677 aaPredicted RBP8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 PSMC4P43686 418 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 FXR1P51114 621 aaKnown RBP eCLIP8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 AFF3P51826 1226 aaKnown RBP8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 LRP8Q14114 963 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 ERV3-1Q14264 604 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 ARHGEF6Q15052 776 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 KRBOX4Q5JUW0 171 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 ATAT1Q5SQI0 421 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms