RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ZNF274Q96GC6 653 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 GPR101Q96P66 508 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 CENPOQ9BU64 300 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 TRIM39Q9HCM9 518 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 EPB41L4AQ9HCS5 686 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 ZNF277Q9NRM2 450 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 WNT7AO00755 349 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 PLD2O14939 933 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 ATE1O95260 518 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 CHGBP05060 677 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 IMPDH2P12268 514 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 BTDP43251 543 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 AK2P54819 239 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 GRAMD1BQ3KR37 738 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 ADCK5Q3MIX3 580 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 LLGL2Q6P1M3 1020 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 CCDC84Q86UT8 332 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 MB21D2Q8IYB1 491 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 BHLHE41Q9C0J9 482 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 DCP1AQ9NPI6 582 aaPredicted RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 ANLNQ9NQW6 1124 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 LUC7L2Q9Y383 392 aaKnown RBP8.06□□□□□ -1.12
CLCN3-206ENST00000507875 WASF2Q9Y6W5 498 aa8.06□□□□□ -1.12
CLCN3-206ENST00000507875 PPP2R2AP63151 447 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 RPL6Q02878 288 aaKnown RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 PDE4BQ07343 736 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 SART3Q15020 963 aaKnown RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 PPP2R5BQ15173 497 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 PTPN21Q16825 1174 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 KLHL40Q2TBA0 621 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 SV2CQ496J9 727 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 MFSD4BQ5TF39 518 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 FKBP1CQ5VVH2 108 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 MCTP1Q6DN14 999 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 MIGA1Q8NAN2 632 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 DDX1Q92499 740 aaKnown RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 ESR2Q92731 530 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 ATG4CQ96DT6 458 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 LRGUKQ96M69 825 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 TM9SF2Q99805 663 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 LLPHQ9BRT6 129 aaKnown RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 DBNDD1Q9H9R9 158 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 AATFQ9NY61 560 aaKnown RBP eCLIP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 DAGLAQ9Y4D2 1042 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 SCINQ9Y6U3 715 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 NID2Q14112 1375 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 ADAMTSL1Q8N6G6 1762 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 DDNO94850 711 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 THBS1P07996 1170 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 LIFRP42702 1097 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 DYNLL1P63167 89 aaKnown RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 CTR9Q6PD62 1173 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 OLFM4Q6UX06 510 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 STOX1Q6ZVD7 989 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 BRAPQ7Z569 592 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 TEX11Q8IYF3 940 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 LRRC47Q8N1G4 583 aaKnown RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 CERS5Q8N5B7 392 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 ACRBPQ8NEB7 543 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 SCLYQ96I15 445 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 POP1Q99575 1024 aaKnown RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 IDI2Q9BXS1 227 aa8.05□□□□□ -1.12
CLCN3-206ENST00000507875 DHX36Q9H2U1 1008 aaKnown RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 GREB1LQ9C091 1923 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-206ENST00000507875 ENTPD3O75355 529 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 MYBP10242 640 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 XRCC6P12956 609 aaKnown RBP eCLIP8.04□□□□□ -1.122e-6■■■■■ 34.5
CLCN3-206ENST00000507875 RPIAP49247 311 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 SIM2Q14190 667 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-206ENST00000507875 KCTD2Q14681 263 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 E2F5Q15329 346 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 C12orf60Q5U649 245 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 CIAPIN1Q6FI81 312 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 GPC2Q8N158 579 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 MEIOBQ8N635 442 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 MYRIPQ8NFW9 859 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 KIFC2Q96AC6 838 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 LMBRD1Q9NUN5 540 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 REV1Q9UBZ9 1251 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 GJA3Q9Y6H8 435 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 DDX49Q9Y6V7 483 aaKnown RBP8.04□□□□□ -1.12
CLCN3-206ENST00000507875 FZD9O00144 591 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 JMJD7P0C870 316 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 MRE11P49959 708 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 GRM3Q14832 879 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 GNPTABQ3T906 1256 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 NXNQ6DKJ4 435 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 PNMA8AQ86V59 439 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-206ENST00000507875 SH3RF3Q8TEJ3 882 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-206ENST00000507875 DPF2Q92785 391 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 PPP1R14AQ96A00 147 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 TCP11L1Q9NUJ3 509 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 KLHL3Q9UH77 587 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 NDOR1Q9UHB4 597 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLCN3-206ENST00000507875 SLC45A1Q9Y2W3 748 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 KIF3AQ9Y496 699 aa8.04□□□□□ -1.12
CLCN3-206ENST00000507875 TRBV23-1A0A0A0MS06 115 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms