RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 DDX19AQ9NUU7 478 aaKnown RBP9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 SEPT9Q9UHD8 586 aaPredicted RBP9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 MOXD2PA6NHM9 499 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 ZBTB42B2RXF5 422 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 PQBP1O60828 265 aaKnown RBP9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 CUTAO60888 179 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 PRPF40AO75400 957 aaKnown RBP9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 LONP1P36776 959 aaKnown RBP9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 PSMC5P62195 406 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 TRIM60Q495X7 471 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 KRT79Q5XKE5 535 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 SLC39A5Q6ZMH5 540 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 MAEAQ7L5Y9 396 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 PLPPR4Q7Z2D5 763 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 UBE2Q1Q7Z7E8 422 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 RDM1Q8NG50 284 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 AFAP1L1Q8TED9 768 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 STAMQ92783 540 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 MFRPQ9BY79 579 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 SCAND2PQ9GZW5 306 aaPredicted RBP9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 GOLPH3LQ9H4A5 285 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 C11orf49Q9H6J7 331 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 ERAP1Q9NZ08 941 aa9.89□□□□□ -0.83
SCAMP1-202ENST00000506858 EMSYQ7Z589 1322 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 IGSF9BQ9UPX0 1349 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 TREHO43280 583 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 KPNA6O60684 536 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 OATP04181 439 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 SSBP05455 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 CYP2C9P11712 490 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 PLCG1P19174 1290 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 RPA1P27694 616 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 TLE2Q04725 743 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 PPFIA1Q13136 1202 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 GRIK4Q16099 956 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 XKR9Q5GH70 373 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 MARCH8Q5T0T0 291 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 NECAB2Q7Z6G3 386 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 C7orf31Q8N865 590 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 FSIP1Q8NA03 581 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 RASSF8Q8NHQ8 419 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 ERMNQ8TAM6 284 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 ATP8B4Q8TF62 1192 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 LMBR1Q8WVP7 490 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 WNT8BQ93098 351 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 ZNF668Q96K58 619 aaPredicted RBP9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 CTAGE1Q96RT6 745 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 POLR3CQ9BUI4 534 aaPredicted RBP9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 RAB34Q9BZG1 259 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 ZSWIM4Q9H7M6 989 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 ZNF215Q9UL58 517 aaPredicted RBP9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 ATP11BQ9Y2G3 1177 aa9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 TRIP12Q14669 1992 aaPredicted RBP9.88□□□□□ -0.83
SCAMP1-202ENST00000506858 NPHP3-ACAD11A0A0J9YXS1 232 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 ARVCFO00192 962 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 YWHABP31946 246 aaKnown RBP9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 NDUFA8P51970 172 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 RAD51AP2Q09MP3 1159 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 DRP2Q13474 957 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 RESP18Q5W5W9 173 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 RUFY4Q6ZNE9 571 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 LRRC71Q8N4P6 559 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 ATP6V0A1Q93050 837 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 DHX58Q96C10 678 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 CEP170P1Q96L14 293 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 PPP1R16BQ96T49 567 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 TUFT1Q9NNX1 390 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 BLOC1S4Q9NUP1 217 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 MYH9P35579 1960 aaKnown RBP9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 SCN10AQ9Y5Y9 1956 aa9.87□□□□□ -0.83
SCAMP1-202ENST00000506858 WDR81Q562E7 1941 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 A0A0U1RQG5 324 aaPredicted RBP9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 POLR2DO15514 142 aaKnown RBP9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 HBP1O60381 514 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 B4GALT4O60513 344 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 PFKFB1P16118 471 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 LIG1P18858 919 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 KLRC1P26715 233 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 CASP1P29466 404 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 CDK7P50613 346 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 RTP1P59025 263 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 TMEM62Q0P6H9 643 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 MCM6Q14566 821 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 TMEM119Q4V9L6 283 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 NAALADL2Q58DX5 795 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 XKR3Q5GH77 459 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 ADALQ6DHV7 355 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 SH3RF1Q7Z6J0 888 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 C4orf19Q8IY42 314 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 GRAMD1CQ8IYS0 662 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 ANKLE1Q8NAG6 615 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 CDK5RAP3Q96JB5 506 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 AK8Q96MA6 479 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 CEP89Q96ST8 783 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 CCSER1Q9C0I3 900 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 FAM49AQ9H0Q0 323 aaPredicted RBP9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 BHMT2Q9H2M3 363 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 SUGCTQ9HAC7 445 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 NRBP2Q9NSY0 501 aa9.86□□□□□ -0.83
SCAMP1-202ENST00000506858 C17orf102A2RUQ5 167 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms