RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 TPM4P67936 248 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 PDE4BQ07343 736 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 SEMA3FQ13275 785 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 GPM6BQ13491 265 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 ARID5BQ14865 1188 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 UBE3CQ15386 1083 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 TTC31Q49AM3 519 aaPredicted RBP5.08□□□□□ -1.6
MATR3-202ENST00000502422 RNF20Q5VTR2 975 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 PDXDC2PQ6P474 469 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 LUZP1Q86V48 1076 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 ANKS1AQ92625 1134 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 SAMD11Q96NU1 681 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 PURBQ96QR8 312 aaKnown RBP5.08□□□□□ -1.6
MATR3-202ENST00000502422 MED4Q9NPJ6 270 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 KCND1Q9NSA2 647 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 PSD3Q9NYI0 1048 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 SYNPO2Q9UMS6 1093 aa5.08□□□□□ -1.6
MATR3-202ENST00000502422 FCF1Q9Y324 198 aaKnown RBP5.08□□□□□ -1.6
MATR3-202ENST00000502422 CCDC171Q6TFL3 1326 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 TPD52L2O43399 206 aaKnown RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 AMHP03971 560 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 TXNP10599 105 aaKnown RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 SOX11P35716 441 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 TDO2P48775 406 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 BAATQ14032 418 aaPredicted RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 EPC2Q52LR7 807 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 SBK1Q52WX2 424 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 TCEAL5Q5H9L2 206 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 TEX35Q5T0J7 233 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 FOXR1Q6PIV2 292 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 KCTD1Q719H9 257 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 RNF135Q8IUD6 432 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 C7orf31Q8N865 590 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 SCFD2Q8WU76 684 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 EDAQ92838 391 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 IL17RAQ96F46 866 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 YME1L1Q96TA2 773 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 PUS7LQ9H0K6 701 aaKnown RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 SEMA4AQ9H3S1 761 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 NSUN3Q9H649 340 aaKnown RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 STX8Q9UNK0 236 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 PPME1Q9Y570 386 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 SCN10AQ9Y5Y9 1956 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 PALM3A6NDB9 673 aaPredicted RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 H3BNC9 293 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 STXBP3O00186 592 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 UPP2O95045 317 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 CPP00450 1065 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 SLC3A2P08195 630 aaKnown RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 CKBP12277 381 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 CASTP20810 708 aaKnown RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 RFX1P22670 979 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 CALML3P27482 149 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 OAS2P29728 719 aaKnown RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 MCM2P49736 904 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 SNAP25P60880 206 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 PTPN14Q15678 1187 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 CLUL1Q15846 466 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 HERC4Q5GLZ8 1057 aaPredicted RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 GDF6Q6KF10 455 aaPredicted RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 CHST3Q7LGC8 479 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 LRRC8AQ8IWT6 810 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 ARMC2Q8NEN0 867 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 PRSS33Q8NF86 280 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 MORC4Q8TE76 937 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 BAP1Q92560 729 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 ATOH1Q92858 354 aaPredicted RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 COPS5Q92905 334 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 ZNF775Q96BV0 537 aaPredicted RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 CBX8Q9HC52 389 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 TFIP11Q9UBB9 837 aaKnown RBP5.07□□□□□ -1.6
MATR3-202ENST00000502422 SUFUQ9UMX1 484 aa5.07□□□□□ -1.6
MATR3-202ENST00000502422 ZNF318Q5VUA4 2279 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 EIF3CLB5ME19 914 aaKnown RBP5.06□□□□□ -1.6
MATR3-202ENST00000502422 PIK3CDO00329 1044 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 ATP8B1O43520 1251 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 KIF1CO43896 1103 aaKnown RBP5.06□□□□□ -1.6
MATR3-202ENST00000502422 PLA2G6O60733 806 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 NBNO60934 754 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 SEC31AO94979 1220 aaKnown RBP5.06□□□□□ -1.6
MATR3-202ENST00000502422 CXCL10P02778 98 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 CHGBP05060 677 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 ICAM1P05362 532 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 CDC25BP30305 580 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 ACTN2P35609 894 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 CCZ1BP86790 482 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 CCZ1P86791 482 aaPredicted RBP5.06□□□□□ -1.6
MATR3-202ENST00000502422 TFAP4Q01664 338 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 KCNC4Q03721 635 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 PTK2Q05397 1052 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 SMAD2Q15796 467 aaKnown RBP5.06□□□□□ -1.6
MATR3-202ENST00000502422 ARHGAP29Q52LW3 1261 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 RCSD1Q6JBY9 416 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 CEP85Q6P2H3 762 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.06□□□□□ -1.64e-6■■□□□ 11.5
MATR3-202ENST00000502422 RNF207Q6ZRF8 634 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 RPAINQ86UA6 219 aa5.06□□□□□ -1.6
MATR3-202ENST00000502422 CCAR2Q8N163 923 aaKnown RBP5.06□□□□□ -1.6
MATR3-202ENST00000502422 SREK1Q8WXA9 508 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms