RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 PHF7Q9BWX1 381 aaPredicted RBP11.15□□□□□ -0.62
SCNM1-206ENST00000497147 ZMYND12Q9H0C1 365 aa11.15□□□□□ -0.62
SCNM1-206ENST00000497147 EHMT1Q9H9B1 1298 aa11.15□□□□□ -0.62
SCNM1-206ENST00000497147 RC3H2Q9HBD1 1191 aaKnown RBP11.15□□□□□ -0.62
SCNM1-206ENST00000497147 BRMS1Q9HCU9 246 aa11.15□□□□□ -0.62
SCNM1-206ENST00000497147 DDX41Q9UJV9 622 aaKnown RBP11.15□□□□□ -0.62
SCNM1-206ENST00000497147 HOXD8P13378 290 aaPredicted RBP11.14□□□□□ -0.63
SCNM1-206ENST00000497147 ANP32AP39687 249 aaKnown RBP11.14□□□□□ -0.63
SCNM1-206ENST00000497147 NUBP1P53384 320 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 GHRHRQ02643 423 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 SAFBQ15424 915 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCNM1-206ENST00000497147 PTPN21Q16825 1174 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 MCTP2Q6DN12 878 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 FRMD5Q7Z6J6 570 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 DHX37Q8IY37 1157 aaKnown RBP11.14□□□□□ -0.63
SCNM1-206ENST00000497147 ADSSL1Q8N142 457 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 EFHBQ8N7U6 833 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 PPTC7Q8NI37 304 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 INTS4Q96HW7 963 aaKnown RBP11.14□□□□□ -0.63
SCNM1-206ENST00000497147 TAAR1Q96RJ0 339 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 KATNAL1Q9BW62 490 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 COL20A1Q9P218 1284 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 BARX2Q9UMQ3 279 aaPredicted RBP11.14□□□□□ -0.63
SCNM1-206ENST00000497147 PCDHA4Q9UN74 947 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 KCNJ14Q9UNX9 436 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 RALGAPA2Q2PPJ7 1873 aa11.14□□□□□ -0.63
SCNM1-206ENST00000497147 NCOR2Q9Y618 2525 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 H3BQV1 296 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 MEIS2O14770 477 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
SCNM1-206ENST00000497147 CTSHP09668 335 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 EIF2AK2P19525 551 aaKnown RBP11.13□□□□□ -0.63
SCNM1-206ENST00000497147 HOXC8P31273 242 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 KRT2P35908 639 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 AP3B2Q13367 1082 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 GNL2Q13823 731 aaKnown RBP11.13□□□□□ -0.63
SCNM1-206ENST00000497147 JAKMIP3Q5VZ66 844 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 BLIDQ8IZY5 108 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 TMEM105Q8N8V8 129 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 RIPOR3Q96MK2 946 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 IWS1Q96ST2 819 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 PXMP2Q9NR77 195 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
SCNM1-206ENST00000497147 PCDHGC5Q9Y5F6 944 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 CACNA1BQ00975 2339 aa11.13□□□□□ -0.63
SCNM1-206ENST00000497147 ADGRA3Q8IWK6 1321 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 TREHO43280 583 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 SORBS3O60504 671 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 CCND2P30279 289 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 NRIP1P48552 1158 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 RBM10P98175 930 aaKnown RBP11.12□□□□□ -0.63
SCNM1-206ENST00000497147 GUCY1B3Q02153 619 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 LAMC2Q13753 1193 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 RBM23Q86U06 439 aaKnown RBP11.12□□□□□ -0.63
SCNM1-206ENST00000497147 DAGLBQ8NCG7 672 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 SUSD6Q92537 303 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 ATP6V0A1Q93050 837 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 NKD2Q969F2 451 aaPredicted RBP11.12□□□□□ -0.63
SCNM1-206ENST00000497147 ZNF689Q96CS4 500 aaPredicted RBP11.12□□□□□ -0.63
SCNM1-206ENST00000497147 C16orf70Q9BSU1 422 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 PHF20Q9BVI0 1012 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 GJB4Q9NTQ9 266 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 PCDHA6Q9UN73 950 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 RWDD3Q9Y3V2 267 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 PCDHA8Q9Y5H6 950 aa11.12□□□□□ -0.63
SCNM1-206ENST00000497147 CFAP47Q6ZTR5 3102 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 CCDC194A0A1B0GVG4 234 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 PPFIA4O75335 1185 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 ITGB1P05556 798 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 MYCLP12524 364 aaPredicted RBP11.11□□□□□ -0.63
SCNM1-206ENST00000497147 PDCP20941 246 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 STXBP2Q15833 593 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 HSDL1Q3SXM5 330 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 LARP1BQ659C4 914 aaKnown RBP11.11□□□□□ -0.63
SCNM1-206ENST00000497147 SPRYD3Q8NCJ5 442 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 FBXO18Q8NFZ0 1043 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 VN1R2Q8NFZ6 395 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 SPPL3Q8TCT6 385 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 RASGRP4Q8TDF6 673 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 RMDN1Q96DB5 314 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 PGBD1Q96JS3 809 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 PDCD2LQ9BRP1 358 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 PLVAPQ9BX97 442 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
SCNM1-206ENST00000497147 C17orf102A2RUQ5 167 aa11.1□□□□□ -0.63
SCNM1-206ENST00000497147 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
SCNM1-206ENST00000497147 NR3C2P08235 984 aa11.1□□□□□ -0.63
SCNM1-206ENST00000497147 SMIM10L2AP0DMW4 78 aa11.1□□□□□ -0.63
SCNM1-206ENST00000497147 SMIM10L2BP0DMW5 78 aa11.1□□□□□ -0.63
SCNM1-206ENST00000497147 ATF7P17544 494 aaPredicted RBP11.1□□□□□ -0.63
SCNM1-206ENST00000497147 CLK2P49760 499 aaKnown RBP11.1□□□□□ -0.63
SCNM1-206ENST00000497147 BTG3Q14201 252 aaPredicted RBP11.1□□□□□ -0.63
SCNM1-206ENST00000497147 PGM5Q15124 567 aa11.1□□□□□ -0.63
SCNM1-206ENST00000497147 MYSM1Q5VVJ2 828 aa11.1□□□□□ -0.63
SCNM1-206ENST00000497147 MCTP1Q6DN14 999 aa11.1□□□□□ -0.63
SCNM1-206ENST00000497147 KRT25Q7Z3Z0 450 aa11.1□□□□□ -0.63
SCNM1-206ENST00000497147 DIS3L2Q8IYB7 885 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms