RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 CEP170P1Q96L14 293 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 PYM1Q9BRP8 204 aaKnown RBP20.47■□□□□ 0.87
TSSC4-210ENST00000496468 NIFKQ9BYG3 293 aaKnown RBP20.47■□□□□ 0.87
TSSC4-210ENST00000496468 STK17AQ9UEE5 414 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 DBR1Q9UK59 544 aaKnown RBP20.47■□□□□ 0.87
TSSC4-210ENST00000496468 MROH7Q68CQ1 1323 aa20.47■□□□□ 0.87
TSSC4-210ENST00000496468 A0A1B0GVL5 298 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 ARHGEF35A5YM69 484 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 RRN3P2A6NIE6 340 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 E9PMD0 336 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 ZBTB39O15060 712 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 EYA4O95677 639 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 GNAT1P11488 350 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 HOXC8P31273 242 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 RARRES1P49788 294 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 UBE2HP62256 183 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 XKR9Q5GH70 373 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 KCNK18Q7Z418 384 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 TRAPPC12Q8WVT3 735 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 GOLPH3LQ9H4A5 285 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 CYP26B1Q9NR63 512 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 SETD4Q9NVD3 440 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 TUBE1Q9UJT0 475 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 KCNH3Q9ULD8 1083 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 HPSEQ9Y251 543 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 PPME1Q9Y570 386 aa20.46■□□□□ 0.87
TSSC4-210ENST00000496468 KAT6AQ92794 2004 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 A0A087WWV3 80 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 ZBTB42B2RXF5 422 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 PRPF40AO75400 957 aaKnown RBP20.45■□□□□ 0.86
TSSC4-210ENST00000496468 XRCC6P12956 609 aaKnown RBP eCLIP20.45■□□□□ 0.86
TSSC4-210ENST00000496468 NPEPPSP55786 919 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 TBC1D8BQ0IIM8 1120 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 SNX17Q15036 470 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 GDF6Q6KF10 455 aaPredicted RBP20.45■□□□□ 0.86
TSSC4-210ENST00000496468 SLC39A5Q6ZMH5 540 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 RAD54LQ92698 747 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 DHX58Q96C10 678 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 SH2D3AQ9BRG2 576 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 BHMT2Q9H2M3 363 aa20.45■□□□□ 0.86
TSSC4-210ENST00000496468 FAM237AA0A1B0GTK4 181 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 POLR2DO15514 142 aaKnown RBP20.44■□□□□ 0.86
TSSC4-210ENST00000496468 PQBP1O60828 265 aaKnown RBP20.44■□□□□ 0.86
TSSC4-210ENST00000496468 GADD45BO75293 160 aaPredicted RBP20.44■□□□□ 0.86
TSSC4-210ENST00000496468 C22orf31O95567 290 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 SSBP05455 408 aaKnown RBP eCLIP20.44■□□□□ 0.86
TSSC4-210ENST00000496468 SYKP43405 635 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 NDUFA8P51970 172 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 POLGP54098 1239 aaPredicted RBP20.44■□□□□ 0.86
TSSC4-210ENST00000496468 TARBP2Q15633 366 aaKnown RBP20.44■□□□□ 0.86
TSSC4-210ENST00000496468 TRIM60Q495X7 471 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 C1orf53Q5VUE5 145 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 IQUBQ8NA54 791 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 LRRC15Q8TF66 581 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 SLC7A3Q8WY07 619 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 LARP4BQ92615 738 aaKnown RBP20.44■□□□□ 0.86
TSSC4-210ENST00000496468 PANK2Q9BZ23 570 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 CUEDC2Q9H467 287 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 BLOC1S4Q9NUP1 217 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 NOD1Q9Y239 953 aa20.44■□□□□ 0.86
TSSC4-210ENST00000496468 DNAH12Q6ZR08 3092 aa20.43■□□□□ 0.86
TSSC4-210ENST00000496468 USO1O60763 962 aaKnown RBP20.43■□□□□ 0.86
TSSC4-210ENST00000496468 PLA2G4BP0C869 781 aa20.43■□□□□ 0.86
TSSC4-210ENST00000496468 RFC5P40937 340 aa20.43■□□□□ 0.86
TSSC4-210ENST00000496468 RTP1P59025 263 aa20.43■□□□□ 0.86
TSSC4-210ENST00000496468 HIC1Q14526 733 aa20.43■□□□□ 0.86
TSSC4-210ENST00000496468 NAALADL2Q58DX5 795 aa20.43■□□□□ 0.86
TSSC4-210ENST00000496468 ATP6V0A4Q9HBG4 840 aa20.43■□□□□ 0.86
TSSC4-210ENST00000496468 BMP2KQ9NSY1 1161 aaPredicted RBP20.43■□□□□ 0.86
TSSC4-210ENST00000496468 TRMT13Q9NUP7 481 aaKnown RBP20.43■□□□□ 0.86
TSSC4-210ENST00000496468 MBLAC1A4D2B0 266 aaPredicted RBP20.42■□□□□ 0.86
TSSC4-210ENST00000496468 TLR3O15455 904 aaKnown RBP20.42■□□□□ 0.86
TSSC4-210ENST00000496468 B4GALT4O60513 344 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 DGAT1O75907 488 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 CDK7P50613 346 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 ZNF200P98182 395 aaPredicted RBP20.42■□□□□ 0.86
TSSC4-210ENST00000496468 FAM160A1Q05DH4 1040 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 MCM6Q14566 821 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 EMC2Q15006 297 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 E2F4Q16254 413 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 PTGISQ16647 500 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 LRRC26Q2I0M4 334 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 MTHFD1LQ6UB35 978 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 FAM126BQ8IXS8 530 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 EXOC8Q8IYI6 725 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 CEP57L1Q8IYX8 460 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 RETREG2Q8NC44 543 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 CEP89Q96ST8 783 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 JPH2Q9BR39 696 aaPredicted RBP20.42■□□□□ 0.86
TSSC4-210ENST00000496468 MAGEF1Q9HAY2 307 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 ATP11BQ9Y2G3 1177 aa20.42■□□□□ 0.86
TSSC4-210ENST00000496468 ALPK3Q96L96 1907 aa20.41■□□□□ 0.86
TSSC4-210ENST00000496468 MAGEB2O15479 319 aa20.41■□□□□ 0.86
TSSC4-210ENST00000496468 TREHO43280 583 aa20.41■□□□□ 0.86
TSSC4-210ENST00000496468 KLRC1P26715 233 aa20.41■□□□□ 0.86
TSSC4-210ENST00000496468 SLC12A3P55017 1021 aa20.41■□□□□ 0.86
TSSC4-210ENST00000496468 ADAM17P78536 824 aa20.41■□□□□ 0.86
TSSC4-210ENST00000496468 MARCH8Q5T0T0 291 aa20.41■□□□□ 0.86
TSSC4-210ENST00000496468 PADI6Q6TGC4 694 aa20.41■□□□□ 0.86
TSSC4-210ENST00000496468 ANKRD33Q7Z3H0 272 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms