RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 PLA2G4BP0C869 781 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 MRPS9P82933 396 aaKnown RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 HERC4Q5GLZ8 1057 aaPredicted RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 FAM173BQ6P4H8 233 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 PADI6Q6TGC4 694 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 CATSPER4Q7RTX7 472 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 CREBRFQ8IUR6 639 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 SYMPKQ92797 1274 aaKnown RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 EMID1Q96A84 441 aaPredicted RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 PURBQ96QR8 312 aaKnown RBP9.56□□□□□ -0.88
U2AF1-212ENST00000496462 SEL1LQ9UBV2 794 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 PHIPQ8WWQ0 1821 aa9.56□□□□□ -0.88
U2AF1-212ENST00000496462 POTEMA6NI47 508 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 XPOTO43592 962 aaKnown RBP9.55□□□□□ -0.88
U2AF1-212ENST00000496462 AFMP43652 599 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 GRIK4Q16099 956 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 FAM178BQ8IXR5 827 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 ZBED2Q9BTP6 218 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 EMSYQ7Z589 1322 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 CARNS1A5YM72 827 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 A6NJR5 290 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 INO80B-WBP1J3KQ70 363 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 POLR2DO15514 142 aaKnown RBP9.55□□□□□ -0.88
U2AF1-212ENST00000496462 NRDCO43847 1150 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 DTNBO60941 627 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 YARSP54577 528 aaKnown RBP9.55□□□□□ -0.88
U2AF1-212ENST00000496462 CETN1Q12798 172 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 PTGISQ16647 500 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 GPR20Q99678 358 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 BHMT2Q9H2M3 363 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 C17orf75Q9HAS0 396 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 KMT5AQ9NQR1 393 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.55□□□□□ -0.88
U2AF1-212ENST00000496462 PSMA7O14818 248 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 CAND2O75155 1236 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 CST5P28325 142 aaPredicted RBP9.55□□□□□ -0.88
U2AF1-212ENST00000496462 GJA8P48165 433 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 COPS5Q92905 334 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 KCNMB3Q9NPA1 279 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 MYH4Q9Y623 1939 aa9.55□□□□□ -0.88
U2AF1-212ENST00000496462 ZBBXA8MT70 800 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 ARVCFO00192 962 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 GPR182O15218 404 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 SLC37A4O43826 429 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 PSMD10O75832 226 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 STAG3L1P0CL83 205 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 KCNA2P16389 499 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 SEMA3FQ13275 785 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 KYAT1Q16773 422 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 MAEAQ7L5Y9 396 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 SUCLA2Q9P2R7 463 aaPredicted RBP9.54□□□□□ -0.88
U2AF1-212ENST00000496462 DBR1Q9UK59 544 aaKnown RBP9.54□□□□□ -0.88
U2AF1-212ENST00000496462 TRIOBPQ9H2D6 2365 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 FOCADQ5VW36 1801 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 DENND3A2RUS2 1198 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 PES1O00541 588 aaKnown RBP9.54□□□□□ -0.88
U2AF1-212ENST00000496462 ZNF286BP0CG31 522 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 KRT13P13646 458 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 INSRRP14616 1297 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 THPOP40225 353 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 TRIM32Q13049 653 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 PPIGQ13427 754 aaKnown RBP eCLIP9.54□□□□□ -0.88
U2AF1-212ENST00000496462 MAPK6Q16659 721 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 USP38Q8NB14 1042 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 FAM193BQ96PV7 902 aaPredicted RBP9.54□□□□□ -0.88
U2AF1-212ENST00000496462 MRPL44Q9H9J2 332 aaKnown RBP9.54□□□□□ -0.88
U2AF1-212ENST00000496462 PARVGQ9HBI0 331 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 DACT1Q9NYF0 836 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 ODF2LQ9ULJ1 636 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 PCDHA7Q9UN72 937 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 FRMPD4Q14CM0 1322 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 SYNRGQ9UMZ2 1314 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 BICDL2A1A5D9 508 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 ARHGAP1Q07960 439 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
U2AF1-212ENST00000496462 SLC35G1Q2M3R5 365 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 NBPF20Q3BBV1 942 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 TAPT1Q6NXT6 567 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 FAM114A1Q8IWE2 563 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 NLRP4Q96MN2 994 aa9.54□□□□□ -0.88
U2AF1-212ENST00000496462 FAM205CA6NFA0 338 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 HOXA2O43364 376 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 GTPBP6O43824 516 aaPredicted RBP9.53□□□□□ -0.88
U2AF1-212ENST00000496462 DDIT3P35638 169 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 LIG4P49917 911 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 KARSQ15046 597 aaKnown RBP9.53□□□□□ -0.88
U2AF1-212ENST00000496462 PCBP1Q15365 356 aaKnown RBP eCLIP9.53□□□□□ -0.88
U2AF1-212ENST00000496462 EFCAB12Q6NXP0 572 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 PGBD4Q96DM1 585 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 PAWRQ96IZ0 340 aaKnown RBP9.53□□□□□ -0.88
U2AF1-212ENST00000496462 MBOAT7Q96N66 472 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 TMEM206Q9H813 350 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 CYP26B1Q9NR63 512 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 ANO10Q9NW15 660 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 K7ERI5 159 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 RPS6KA5O75582 802 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 SMIM10L2AP0DMW4 78 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 SMIM10L2BP0DMW5 78 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 CCDC192P0DO97 292 aa9.53□□□□□ -0.88
U2AF1-212ENST00000496462 KLRC1P26715 233 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms