RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 WDR48Q8TAF3 677 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 TGFBRAP1Q8WUH2 860 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 CPA5Q8WXQ8 436 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 RAX2Q96IS3 184 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 RTFDC1Q9BY42 306 aaPredicted RBP7.16□□□□□ -1.26
SSR3-208ENST00000496050 UCKL1Q9NWZ5 548 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 DNAJC28Q9NX36 388 aa7.16□□□□□ -1.26
SSR3-208ENST00000496050 FZD9O00144 591 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 NFIBO00712 420 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 PRC1O43663 620 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 H2AFYO75367 372 aaKnown RBP7.15□□□□□ -1.26
SSR3-208ENST00000496050 APOL3O95236 402 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 MTHFD2P13995 350 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 PTGS1P23219 599 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 STAT5AP42229 794 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 PFKPQ01813 784 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 SLC6A3Q01959 620 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 ALDH6A1Q02252 535 aaKnown RBP7.15□□□□□ -1.26
SSR3-208ENST00000496050 ADCY2Q08462 1091 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 MOGSQ13724 837 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 TARBP2Q15633 366 aaKnown RBP7.15□□□□□ -1.26
SSR3-208ENST00000496050 CT83Q5H943 113 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 TMEM240Q5SV17 173 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 NXNQ6DKJ4 435 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 CBLL1Q75N03 491 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 TMC6Q7Z403 805 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 IGDCC4Q8TDY8 1250 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 SSH1Q8WYL5 1049 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 FERMT2Q96AC1 680 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 FOXB1Q99853 325 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 MYL10Q9BUA6 226 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 RHOBTB2Q9BYZ6 727 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 SEMA4AQ9H3S1 761 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 POFUT1Q9H488 388 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 PCDH18Q9HCL0 1135 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 ZFP64Q9NPA5 681 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 SIRT5Q9NXA8 310 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 GALNT8Q9NY28 637 aa7.15□□□□□ -1.26
SSR3-208ENST00000496050 PNMA8BQ9ULN7 279 aaPredicted RBP7.15□□□□□ -1.26
SSR3-208ENST00000496050 PCDHGA12O60330 932 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 CYP2C19P33261 490 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 MANFP55145 182 aaKnown RBP7.14□□□□□ -1.27
SSR3-208ENST00000496050 CACNB2Q08289 660 aaPredicted RBP7.14□□□□□ -1.27
SSR3-208ENST00000496050 CR1LQ2VPA4 569 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 PRAMEF9Q5VWM5 478 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 VASNQ6EMK4 673 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 SLFN12LQ6IEE8 588 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 CXorf57Q6NSI4 855 aaKnown RBP7.14□□□□□ -1.27
SSR3-208ENST00000496050 RSAD2Q8WXG1 361 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 EAF2Q96CJ1 260 aaPredicted RBP7.14□□□□□ -1.27
SSR3-208ENST00000496050 SLC39A2Q9NP94 309 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 INCENPQ9NQS7 918 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 CCM2LQ9NUG4 571 aaPredicted RBP7.14□□□□□ -1.27
SSR3-208ENST00000496050 NOB1Q9ULX3 412 aaKnown RBP7.14□□□□□ -1.27
SSR3-208ENST00000496050 INVSQ9Y283 1065 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 PCDHGA9Q9Y5G4 932 aaKnown RBP7.14□□□□□ -1.27
SSR3-208ENST00000496050 PCDHGA8Q9Y5G5 932 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 PCDHGA7Q9Y5G6 932 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 PCDHGA6Q9Y5G7 932 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 PCDHGA3Q9Y5H0 932 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 PCDHGA2Q9Y5H1 932 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 OAS3Q9Y6K5 1087 aaKnown RBP7.14□□□□□ -1.27
SSR3-208ENST00000496050 NUMBLQ9Y6R0 609 aa7.14□□□□□ -1.27
SSR3-208ENST00000496050 ST20-MTHFSA0A0A6YYL1 179 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 PRSS38A1L453 326 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 ZNF839A8K0R7 811 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 ELL2O00472 640 aaPredicted RBP7.13□□□□□ -1.27
SSR3-208ENST00000496050 PRLP01236 227 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 ASGR2P07307 311 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 PF4V1P10720 104 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 ATF3P18847 181 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 VIPR1P32241 457 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 BCAR1P56945 870 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 MRPS9P82933 396 aaKnown RBP7.13□□□□□ -1.27
SSR3-208ENST00000496050 SRSF3P84103 164 aaKnown RBP7.13□□□□□ -1.27
SSR3-208ENST00000496050 ZNF200P98182 395 aaPredicted RBP7.13□□□□□ -1.27
SSR3-208ENST00000496050 ODF1Q14990 250 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 MLC1Q15049 377 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 KIAA1841Q6NSI8 718 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 CCDC62Q6P9F0 684 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 MPZL3Q6UWV2 235 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 C14orf80Q86SX3 495 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 TTC8Q8TAM2 541 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 RPGRQ92834 1020 aaKnown RBP7.13□□□□□ -1.27
SSR3-208ENST00000496050 HSPBAP1Q96EW2 488 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 RNF38Q9H0F5 515 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 GPR45Q9Y5Y3 372 aa7.13□□□□□ -1.27
SSR3-208ENST00000496050 CLEC2LP0C7M8 214 aa7.12□□□□□ -1.27
SSR3-208ENST00000496050 ECE1P42892 770 aa7.12□□□□□ -1.27
SSR3-208ENST00000496050 GTF2H3Q13889 308 aa7.12□□□□□ -1.27
SSR3-208ENST00000496050 HLTFQ14527 1009 aaKnown RBP eCLIP7.12□□□□□ -1.27
SSR3-208ENST00000496050 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.12□□□□□ -1.27
SSR3-208ENST00000496050 GFOD2Q3B7J2 385 aa7.12□□□□□ -1.27
SSR3-208ENST00000496050 TOR2AQ5JU69 321 aa7.12□□□□□ -1.27
SSR3-208ENST00000496050 KANSL1Q7Z3B3 1105 aa7.12□□□□□ -1.27
SSR3-208ENST00000496050 ZNF605Q86T29 641 aa7.12□□□□□ -1.27
SSR3-208ENST00000496050 CCAR1Q8IX12 1150 aaKnown RBP7.12□□□□□ -1.27
SSR3-208ENST00000496050 MAGEB6Q8N7X4 407 aa7.12□□□□□ -1.27
SSR3-208ENST00000496050 JADE3Q92613 823 aa7.12□□□□□ -1.27
SSR3-208ENST00000496050 NUP88Q99567 741 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms