RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 MYH15Q9Y2K3 1946 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 ZBTB42B2RXF5 422 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 ZBTB39O15060 712 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 SLC26A4O43511 780 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 CYP2C9P11712 490 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 NPEPPSP55786 919 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 ADAM17P78536 824 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 TBC1D8BQ0IIM8 1120 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 PTK7Q13308 1070 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 ECM1Q16610 540 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 MARCH8Q5T0T0 291 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 MTHFD1LQ6UB35 978 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 ZNF579Q8NAF0 562 aaKnown RBP16.47■□□□□ 0.23
HDAC9-226ENST00000496026 SYMPKQ92797 1274 aaKnown RBP16.47■□□□□ 0.23
HDAC9-226ENST00000496026 ZBTB10Q96DT7 871 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 PLIN2Q99541 437 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 CCSER1Q9C0I3 900 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 NT5C3AQ9H0P0 336 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 GDPD2Q9HCC8 539 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 CYP26B1Q9NR63 512 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 CCDC39Q9UFE4 941 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 PCDHA7Q9UN72 937 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 DNM3Q9UQ16 869 aa16.47■□□□□ 0.23
HDAC9-226ENST00000496026 MBLAC1A4D2B0 266 aaPredicted RBP16.46■□□□□ 0.23
HDAC9-226ENST00000496026 MAGEB2O15479 319 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 XRCC6P12956 609 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDAC9-226ENST00000496026 GRB10Q13322 594 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 KARSQ15046 597 aaKnown RBP16.46■□□□□ 0.23
HDAC9-226ENST00000496026 TARBP2Q15633 366 aaKnown RBP16.46■□□□□ 0.23
HDAC9-226ENST00000496026 HYIQ5T013 277 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 USP49Q70CQ1 688 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 SERINC5Q86VE9 423 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 CCDC155Q8N6L0 562 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 METTL13Q8N6R0 699 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 RETREG2Q8NC44 543 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 PDLIM7Q9NR12 457 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 DBR1Q9UK59 544 aaKnown RBP16.46■□□□□ 0.23
HDAC9-226ENST00000496026 PPME1Q9Y570 386 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 PCDHA2Q9Y5H9 948 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 NR2E3Q9Y5X4 410 aa16.46■□□□□ 0.23
HDAC9-226ENST00000496026 ARHGEF35A5YM69 484 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 C22orf31O95567 290 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 RARRES1P49788 294 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 POLGP54098 1239 aaPredicted RBP16.45■□□□□ 0.22
HDAC9-226ENST00000496026 MLLT1Q03111 559 aaPredicted RBP16.45■□□□□ 0.22
HDAC9-226ENST00000496026 BFSP2Q13515 415 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 TPRNQ4KMQ1 711 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 AXDND1Q5T1B0 1012 aaPredicted RBP16.45■□□□□ 0.22
HDAC9-226ENST00000496026 TAF2Q6P1X5 1199 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 RUFY4Q6ZNE9 571 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 SH3RF1Q7Z6J0 888 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 RSPH3Q86UC2 560 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 EXOC8Q8IYI6 725 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 KCTD17Q8N5Z5 321 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 SLC7A3Q8WY07 619 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 PNMA5Q96PV4 448 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 JPH2Q9BR39 696 aaPredicted RBP16.45■□□□□ 0.22
HDAC9-226ENST00000496026 FAM49AQ9H0Q0 323 aaPredicted RBP16.45■□□□□ 0.22
HDAC9-226ENST00000496026 HIPK3Q9H422 1215 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 SUGCTQ9HAC7 445 aa16.45■□□□□ 0.22
HDAC9-226ENST00000496026 SMIM35A0A1B0GVV1 85 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 TRIM43BA6NCK2 446 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 E9PMD0 336 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 RAG1P15918 1043 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 PLCG1P19174 1290 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 TMOD1P28289 359 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 THPOP40225 353 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 RFC5P40937 340 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 CSPP1Q1MSJ5 1256 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 TMEM119Q4V9L6 283 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 EFCAB12Q6NXP0 572 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 SHC4Q6S5L8 630 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 LRRC71Q8N4P6 559 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 CAGE1Q8TC20 777 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 DNAJB3Q8WWF6 145 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 DHX38Q92620 1227 aaKnown RBP16.44■□□□□ 0.22
HDAC9-226ENST00000496026 TRIM43Q96BQ3 446 aaPredicted RBP16.44■□□□□ 0.22
HDAC9-226ENST00000496026 PPP1R12CQ9BZL4 782 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 BHMT2Q9H2M3 363 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 BMP2KQ9NSY1 1161 aaPredicted RBP16.44■□□□□ 0.22
HDAC9-226ENST00000496026 FAM13BQ9NYF5 915 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 TBX21Q9UL17 535 aa16.44■□□□□ 0.22
HDAC9-226ENST00000496026 ZMYND8Q9ULU4 1186 aaPredicted RBP16.44■□□□□ 0.22
HDAC9-226ENST00000496026 GOLGA6L4A6NEF3 574 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 KIAA0355O15063 1070 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 USO1O60763 962 aaKnown RBP16.43■□□□□ 0.22
HDAC9-226ENST00000496026 MAFO75444 373 aaPredicted RBP16.43■□□□□ 0.22
HDAC9-226ENST00000496026 EYA4O95677 639 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 RPLP2P05387 115 aaKnown RBP16.43■□□□□ 0.22
HDAC9-226ENST00000496026 SSBP05455 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDAC9-226ENST00000496026 SYN1P17600 705 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 DNM2P50570 870 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 RRAGBQ5VZM2 374 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 ADALQ6DHV7 355 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 KCNK18Q7Z418 384 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 WNT8BQ93098 351 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 CEP89Q96ST8 783 aa16.43■□□□□ 0.22
HDAC9-226ENST00000496026 NOC4LQ9BVI4 516 aaKnown RBP16.43■□□□□ 0.22
HDAC9-226ENST00000496026 PANK2Q9BZ23 570 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms