RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 GYPCP04921 128 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 RSPH10BP0C881 870 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 COPB2P35606 906 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 ZNF131P52739 623 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 SLC20A2Q08357 652 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 EDRF1Q3B7T1 1238 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 GPR161Q8N6U8 529 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 NOC4LQ9BVI4 516 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 PARVGQ9HBI0 331 aa20.42■□□□□ 0.86
TSPAN4-212ENST00000494815 NFASCO94856 1347 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 RGS20O76081 388 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 SEC31AO94979 1220 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 CASQ1P31415 396 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 C4orf19Q8IY42 314 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 MRPL44Q9H9J2 332 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 CLEC11AQ9Y240 323 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 PES1O00541 588 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 GNA14O95837 355 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 SLC25A27O95847 323 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 CCNE2O96020 404 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 OSBPP22059 807 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 SNAPC2Q13487 334 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 MIIPQ5JXC2 388 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 NELFCDQ8IXH7 590 aa20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 ZC3H3Q8IXZ2 948 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-212ENST00000494815 B4DLN1 442 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 TRAF5O00463 557 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 TBC1D8O95759 1140 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 KCNA2P16389 499 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 CASP5P51878 434 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 PSMC5P62195 406 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 STXBP2Q15833 593 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 MAN2A1Q16706 1144 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 KNOP1Q1ED39 458 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 CC2D1AQ6P1N0 951 aaPredicted RBP20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 NAA15Q9BXJ9 866 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 TRAF3IP3Q9Y228 551 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 MRFAP1Q9Y605 127 aa20.4■□□□□ 0.86
TSPAN4-212ENST00000494815 SPATA31C2B4DYI2 1134 aa20.39■□□□□ 0.86
TSPAN4-212ENST00000494815 EIF3DO15371 548 aaKnown RBP eCLIP20.39■□□□□ 0.86
TSPAN4-212ENST00000494815 EIF3JO75822 258 aaKnown RBP20.39■□□□□ 0.86
TSPAN4-212ENST00000494815 CNMDO75829 334 aa20.39■□□□□ 0.86
TSPAN4-212ENST00000494815 CASP14P31944 242 aa20.39■□□□□ 0.86
TSPAN4-212ENST00000494815 NCAPG2Q86XI2 1143 aa20.39■□□□□ 0.86
TSPAN4-212ENST00000494815 SLC10A4Q96EP9 437 aa20.39■□□□□ 0.86
TSPAN4-212ENST00000494815 MOV10L1Q9BXT6 1211 aaKnown RBP20.39■□□□□ 0.86
TSPAN4-212ENST00000494815 LCTP09848 1927 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 PDXKO00764 312 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 MARSP56192 900 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 GNG11P61952 73 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 TBC1D8BQ0IIM8 1120 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 FKBP15Q5T1M5 1219 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 PADI6Q6TGC4 694 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 RSRC2Q7L4I2 434 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 MYCT1Q8N699 235 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 ERGIC2Q96RQ1 377 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 WDR24Q96S15 920 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 PAGR1Q9BTK6 254 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 PCDHA10Q9Y5I2 948 aa20.39■□□□□ 0.85
TSPAN4-212ENST00000494815 TULP2O00295 520 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 YWHABP31946 246 aaKnown RBP20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 ICAM3P32942 547 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 RARRES1P49788 294 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 FXR1P51114 621 aaKnown RBP eCLIP20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 PPP2R3AQ06190 1150 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 VWA3BQ502W6 1294 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 GPAT2Q6NUI2 795 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 RETREG2Q8NC44 543 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 CPLX3Q8WVH0 158 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 UBE4BO95155 1302 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 POTEB2H3BUK9 544 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 POLR3GO15318 223 aaPredicted RBP20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 PEX10O60683 326 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 SASH3O75995 380 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 GCNT3O95395 438 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 MYBP10242 640 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 FECHP22830 423 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 ALDH5A1P51649 535 aaPredicted RBP20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 HNRNPH2P55795 449 aaKnown RBP20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 FKBP1BP68106 108 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 MAP1SQ66K74 1059 aaPredicted RBP20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 STXBP4Q6ZWJ1 553 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 IQCDQ96DY2 449 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 NUP58Q9BVL2 599 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 TIPINQ9BVW5 301 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 NDST4Q9H3R1 872 aa20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 JPH1Q9HDC5 661 aaPredicted RBP20.38■□□□□ 0.85
TSPAN4-212ENST00000494815 DKC1O60832 514 aaKnown RBP eCLIP20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 POTEJP0CG39 1038 aa20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 HOXD13P35453 343 aa20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 GJA5P36382 358 aa20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 CNTN2Q02246 1040 aa20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 TXLNBQ8N3L3 684 aa20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 ANKEF1Q9NU02 776 aa20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 TYW1Q9NV66 732 aaKnown RBP20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 RBPJLQ9UBG7 517 aa20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 ASTN1O14525 1302 aa20.37■□□□□ 0.85
TSPAN4-212ENST00000494815 SFI1A8K8P3 1242 aa20.36■□□□□ 0.85
TSPAN4-212ENST00000494815 CETN3O15182 167 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms