RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 BFSP2Q13515 415 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 TMEM240Q5SV17 173 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 ZNF365Q70YC5 407 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 HSCBQ8IWL3 235 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 TDHQ8IZJ6 230 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 SH2D3AQ9BRG2 576 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 TUBE1Q9UJT0 475 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 MYO9BQ13459 2157 aa13.12□□□□□ -0.31
UBA3-211ENST00000493957 HBP1O60381 514 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 NBNO60934 754 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 SELPP16109 830 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 SYT1P21579 422 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 SFNP31947 248 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 SLC26A2P50443 739 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 CYP4A11Q02928 519 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 PPIGQ13427 754 aaKnown RBP eCLIP13.11□□□□□ -0.313e-7■■■□□ 17.7
UBA3-211ENST00000493957 SLFN12Q8IYM2 578 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 C4orf32Q8N8J7 132 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 RETREG2Q8NC44 543 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 CAGE1Q8TC20 777 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 DNAJB3Q8WWF6 145 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 INTS4Q96HW7 963 aaKnown RBP13.11□□□□□ -0.31
UBA3-211ENST00000493957 FAM49AQ9H0Q0 323 aaPredicted RBP13.11□□□□□ -0.31
UBA3-211ENST00000493957 TTC12Q9H892 705 aaPredicted RBP13.11□□□□□ -0.31
UBA3-211ENST00000493957 RGL1Q9NZL6 768 aa13.11□□□□□ -0.31
UBA3-211ENST00000493957 NOL7Q9UMY1 257 aaKnown RBP13.11□□□□□ -0.31
UBA3-211ENST00000493957 BAG4O95429 457 aaKnown RBP13.1□□□□□ -0.31
UBA3-211ENST00000493957 C22orf31O95567 290 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 OATP04181 439 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 OR52Z1P0C646 297 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 GNAT1P11488 350 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 KLRC1P26715 233 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 CTTNQ14247 550 aaKnown RBP13.1□□□□□ -0.31
UBA3-211ENST00000493957 PLA2G4FQ68DD2 849 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 MTHFD1LQ6UB35 978 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 CCDC155Q8N6L0 562 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 RDM1Q8NG50 284 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 BBXQ8WY36 941 aaPredicted RBP13.1□□□□□ -0.31
UBA3-211ENST00000493957 DYDC2Q96IM9 177 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.1□□□□□ -0.31
UBA3-211ENST00000493957 CXXC1Q9P0U4 656 aaPredicted RBP13.1□□□□□ -0.31
UBA3-211ENST00000493957 PCDHA12Q9UN75 941 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 MYH11P35749 1972 aa13.1□□□□□ -0.31
UBA3-211ENST00000493957 COL1A2P08123 1366 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 RRN3P2A6NIE6 340 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 CHRNA1P02708 482 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 TRAPPC10P48553 1259 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 MGAT3Q09327 533 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 TMEM62Q0P6H9 643 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 RESTQ13127 1097 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 PTGDRQ13258 359 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 EPHA7Q15375 998 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 FAM109BQ6ICB4 259 aaPredicted RBP13.09□□□□□ -0.31
UBA3-211ENST00000493957 FAM173BQ6P4H8 233 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 OTOP2Q7RTS6 562 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 RNPC3Q96LT9 517 aaKnown RBP13.09□□□□□ -0.31
UBA3-211ENST00000493957 CEP89Q96ST8 783 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 EIF2AK1Q9BQI3 630 aaKnown RBP13.09□□□□□ -0.31
UBA3-211ENST00000493957 LXNQ9BS40 222 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 SEPT9Q9UHD8 586 aaPredicted RBP13.09□□□□□ -0.31
UBA3-211ENST00000493957 MTMR6Q9Y217 621 aa13.09□□□□□ -0.31
UBA3-211ENST00000493957 A0A087WWV3 80 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 A0A1W2PPC1 479 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 RSPH10B2B2RC85 870 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 ZBTB39O15060 712 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 RSPH10BP0C881 870 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 TECP42680 631 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 FXR1P51114 621 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBA3-211ENST00000493957 PSMC5P62195 406 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 TARBP2Q15633 366 aaKnown RBP13.08□□□□□ -0.32
UBA3-211ENST00000493957 IL17AQ16552 155 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 MTERF2Q49AM1 385 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 ZNF484Q5JVG2 852 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 ANO5Q75V66 913 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 FAM167AQ96KS9 214 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 PPP1R16BQ96T49 567 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 FTOQ9C0B1 505 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBA3-211ENST00000493957 PCDHA2Q9Y5H9 948 aa13.08□□□□□ -0.32
UBA3-211ENST00000493957 DDX11L8A8MPP1 907 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 SLITRK3O94933 977 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 FGBP02675 491 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 CXCL10P02778 98 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 PDCP20941 246 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 RFC2P35250 354 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 QARSP47897 775 aaKnown RBP13.07□□□□□ -0.32
UBA3-211ENST00000493957 CLCN3P51790 818 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 NPEPPSP55786 919 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 ORC2Q13416 577 aaPredicted RBP13.07□□□□□ -0.32
UBA3-211ENST00000493957 DRP2Q13474 957 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 XKR3Q5GH77 459 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 FAM26DQ5JW98 314 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 RASIP1Q5U651 963 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 TAF2Q6P1X5 1199 aa13.07□□□□□ -0.32
UBA3-211ENST00000493957 PSRC1Q6PGN9 363 aaPredicted RBP13.07□□□□□ -0.32
UBA3-211ENST00000493957 RPAINQ86UA6 219 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms