RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792	TUBE1	Q9UJT0	475 aa		11.73	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	KAT6A	Q92794	2004 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	TRIP12	Q14669	1992 aa	Predicted RBP	11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	RRN3P2	A6NIE6	340 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	PRR33	A8MZF0	331 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	PSMD10	O75832	226 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	CKB	P12277	381 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	SFN	P31947	248 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	SLC26A2	P50443	739 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	CALCRL	Q16602	461 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	ZNF618	Q5T7W0	954 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	NCAPH2	Q6IBW4	605 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	SERINC5	Q86VE9	423 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	HERC6	Q8IVU3	1022 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	ETNPPL	Q8TBG4	499 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	TRAPPC12	Q8WVT3	735 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	WNT8B	Q93098	351 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	FAM20A	Q96MK3	541 aa		11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	FOXP1	Q9H334	677 aa	Predicted RBP	11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	NOL7	Q9UMY1	257 aa	Known RBP	11.72	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	IGKV6D-21	A0A0A0MT36	114 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	RSPH10B2	B2RC85	870 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	HBP1	O60381	514 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	NEMF	O60524	1076 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	RSPH10B	P0C881	870 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	ACTN1	P12814	892 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	MRE11	P49959	708 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	GPNMB	Q14956	572 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	ZNF174	Q15697	407 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	LARP1B	Q659C4	914 aa	Known RBP	11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	RUFY4	Q6ZNE9	571 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	RSPH3	Q86UC2	560 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	NOSTRIN	Q8IVI9	506 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	FAM178B	Q8IXR5	827 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	SLFN12	Q8IYM2	578 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	ATP8B4	Q8TF62	1192 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	ZBTB10	Q96DT7	871 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	SLC9A7	Q96T83	725 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	KCNMB3	Q9NPA1	279 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	LMCD1	Q9NZU5	365 aa		11.71	□□□□□ -0.53
TRAPPC12-222	ENST00000493792	SCN5A	Q14524	2016 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	TANC1	Q9C0D5	1861 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	BRWD1	Q9NSI6	2320 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	LCHN	A4D1U4	455 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	KIF28P	B7ZC32	967 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792		K7ELQ4	463 aa	Predicted RBP	11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	TBX3	O15119	743 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	HSP90AA1	P07900	732 aa	Known RBP	11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	HOXC8	P31273	242 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	TXK	P42681	527 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	PRKCE	Q02156	737 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	RBL2	Q08999	1139 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	UGCG	Q16739	394 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	TRIM71	Q2Q1W2	868 aa	Known RBP	11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	TTC38	Q5R3I4	469 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	HSCB	Q8IWL3	235 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	GJD3	Q8N144	294 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	BANK1	Q8NDB2	785 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	RDM1	Q8NG50	284 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	DNAJB3	Q8WWF6	145 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	BBX	Q8WY36	941 aa	Predicted RBP	11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	HAS1	Q92839	578 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	FAM167A	Q96KS9	214 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	NRBP2	Q9NSY0	501 aa		11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	MYH9	P35579	1960 aa	Known RBP	11.7	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	IGSF9B	Q9UPX0	1349 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	VPS37C	A5D8V6	355 aa	Predicted RBP	11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	DDX11L8	A8MPP1	907 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792		M0QZ92	97 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	WNT7A	O00755	349 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	BAIAP3	O94812	1187 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	PARN	O95453	639 aa	Known RBP	11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	OAT	P04181	439 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	ATP4A	P20648	1035 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	KLRC1	P26715	233 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	ADAM17	P78536	824 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	PPP2R5C	Q13362	524 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	NBR1	Q14596	966 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	ZNF484	Q5JVG2	852 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	MARCH8	Q5T0T0	291 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	TAF2	Q6P1X5	1199 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	MTHFD1L	Q6UB35	978 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	METTL13	Q8N6R0	699 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	TTC12	Q9H892	705 aa	Predicted RBP	11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	SUGCT	Q9HAC7	445 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	PCDHA12	Q9UN75	941 aa		11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.69	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	COL1A2	P08123	1366 aa		11.68	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	GBF1	Q92538	1859 aa		11.68	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	WDFY4	Q6ZS81	3184 aa		11.68	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	RBAK-RBAKDN	I3L0D1	243 aa		11.68	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	EML1	O00423	815 aa		11.68	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	ZNF862	O60290	1169 aa		11.68	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	NBN	O60934	754 aa		11.68	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	CAND2	O75155	1236 aa		11.68	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	CXCL10	P02778	98 aa		11.68	□□□□□ -0.54
TRAPPC12-222	ENST00000493792	U2AF2	P26368	475 aa	Known RBP eCLIP	11.68	□□□□□ -0.54

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