RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 KCNT2Q6UVM3 1135 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 NSUN6Q8TEA1 469 aaKnown RBP6.32□□□□□ -1.4
SEC13-219ENST00000492602 LMBR1Q8WVP7 490 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 DNAJB3Q8WWF6 145 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 TAAR1Q96RJ0 339 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 USP26Q9BXU7 913 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 OSBPL6Q9BZF3 934 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 MLXIPQ9HAP2 919 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 LTB4R2Q9NPC1 389 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 PRMT8Q9NR22 394 aaPredicted RBP6.32□□□□□ -1.4
SEC13-219ENST00000492602 SLC2A4RGQ9NR83 387 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 EPS15L1Q9UBC2 864 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 PADI3Q9ULW8 664 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 STX8Q9UNK0 236 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 USP9XQ93008 2570 aaPredicted RBP6.32□□□□□ -1.4
SEC13-219ENST00000492602 ITPR1Q14643 2758 aa6.32□□□□□ -1.4
SEC13-219ENST00000492602 DENND4AQ7Z401 1863 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 ZNF316A6NFI3 1004 aaPredicted RBP6.31□□□□□ -1.4
SEC13-219ENST00000492602 NCAM2O15394 837 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 SURF6O75683 361 aaKnown RBP6.31□□□□□ -1.4
SEC13-219ENST00000492602 EIF2AK2P19525 551 aaKnown RBP6.31□□□□□ -1.4
SEC13-219ENST00000492602 PPM1AP35813 382 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 ADAM17P78536 824 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 PRKCQQ04759 706 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 MTAPQ13126 283 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 PAK2Q13177 524 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 MLF2Q15773 248 aaPredicted RBP6.31□□□□□ -1.4
SEC13-219ENST00000492602 SLC44A4Q53GD3 710 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 SYDE2Q5VT97 1194 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 ARHGEF16Q5VV41 709 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 KIAA1211LQ6NV74 962 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 PROSER1Q86XN7 944 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 NEDD1Q8NHV4 660 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 SLC22A17Q8WUG5 538 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 AUTS2Q8WXX7 1259 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 TBC1D5Q92609 795 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 STAMQ92783 540 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 ZNF558Q96NG5 402 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 KLHL5Q96PQ7 755 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 MYADMQ96S97 322 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 IWS1Q96ST2 819 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 RMDN3Q96TC7 470 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 DNAJC2Q99543 621 aaKnown RBP6.31□□□□□ -1.4
SEC13-219ENST00000492602 DDX23Q9BUQ8 820 aaKnown RBP6.31□□□□□ -1.4
SEC13-219ENST00000492602 ZNF287Q9HBT7 754 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 TNNQ9UQP3 1299 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 NUMBLQ9Y6R0 609 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 MIA3Q5JRA6 1907 aa6.31□□□□□ -1.4
SEC13-219ENST00000492602 CCDC171Q6TFL3 1326 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 PATJQ8NI35 1801 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 NOP56O00567 594 aaKnown RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 AXIN1O15169 862 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 HRO43593 1189 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 GNAI2P04899 355 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 CHGBP05060 677 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 FGFR1P11362 822 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 PLA2G2AP14555 144 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 TARSP26639 723 aaKnown RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 ADD2P35612 726 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 MRPS6P82932 125 aaKnown RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 TFAP4Q01664 338 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 SP2Q02086 613 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 NFX1Q12986 1120 aaKnown RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 SRSF5Q13243 272 aaKnown RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 PPP2R5DQ14738 602 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 USH1GQ495M9 461 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 SBK1Q52WX2 424 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 RNF43Q68DV7 783 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 C15orf39Q6ZRI6 1047 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 ZNF605Q86T29 641 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 TRIM50Q86XT4 487 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 SYTL5Q8TDW5 730 aaPredicted RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 HNRNPLLQ8WVV9 542 aaKnown RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 PIK3R5Q8WYR1 880 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 CLDN23Q96B33 292 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 LRIG1Q96JA1 1093 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 ARRDC1-AS1Q9H2J1 176 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 TMX1Q9H3N1 280 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 WDR6Q9NNW5 1121 aaKnown RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 SPG21Q9NZD8 308 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 COL20A1Q9P218 1284 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 PNMA2Q9UL42 364 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 ZNF215Q9UL58 517 aaPredicted RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 NOB1Q9ULX3 412 aaKnown RBP6.3□□□□□ -1.4
SEC13-219ENST00000492602 MYO18BQ8IUG5 2567 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 RALGAPA1Q6GYQ0 2036 aa6.3□□□□□ -1.4
SEC13-219ENST00000492602 AKAP13Q12802 2813 aa6.29□□□□□ -1.4
SEC13-219ENST00000492602 DENND3A2RUS2 1198 aa6.29□□□□□ -1.4
SEC13-219ENST00000492602 NT5C1B-RDH14C9J2C7 533 aa6.29□□□□□ -1.4
SEC13-219ENST00000492602 M0QZ92 97 aa6.29□□□□□ -1.4
SEC13-219ENST00000492602 ARHGAP6O43182 974 aa6.29□□□□□ -1.4
SEC13-219ENST00000492602 HYAL3O43820 417 aaPredicted RBP6.29□□□□□ -1.4
SEC13-219ENST00000492602 NR3C2P08235 984 aa6.29□□□□□ -1.4
SEC13-219ENST00000492602 ZNF806P0C7X5 589 aa6.29□□□□□ -1.4
SEC13-219ENST00000492602 MYCLP12524 364 aaPredicted RBP6.29□□□□□ -1.4
SEC13-219ENST00000492602 TDGF1P13385 188 aa6.29□□□□□ -1.4
SEC13-219ENST00000492602 LAMP2P13473 410 aa6.29□□□□□ -1.4
SEC13-219ENST00000492602 UBA1P22314 1058 aaKnown RBP6.29□□□□□ -1.4
SEC13-219ENST00000492602 RPS9P46781 194 aaKnown RBP6.29□□□□□ -1.4
SEC13-219ENST00000492602 TMEM62Q0P6H9 643 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms