RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 NEK1Q96PY6 1258 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 PHOX2BQ99453 314 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 CDCA3Q99618 268 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 LNPKQ9C0E8 428 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 AZI2Q9H6S1 392 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 BCAS3Q9H6U6 928 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 RIOX1Q9H6W3 641 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 CLEC1BQ9P126 229 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 PUF60Q9UHX1 559 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 USP15Q9Y4E8 981 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 PCDHB7Q9Y5E2 793 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 CDY2AQ9Y6F7 541 aa11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 MRPL42Q9Y6G3 142 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-203ENST00000492571 LCE2BO14633 110 aa11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 LINC00271P0C7V0 271 aa11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 SCG2P13521 617 aa11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 ATF7P17544 494 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 AVPR2P30518 371 aa11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 CD52P31358 61 aa11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 MRPS6P82932 125 aaKnown RBP11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 HDAC1Q13547 482 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 CBX2Q14781 532 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 ODR4Q5SWX8 454 aa11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 PDE12Q6L8Q7 609 aaKnown RBP11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 RUFY4Q6ZNE9 571 aa11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 CATIPQ7Z7H3 387 aa11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 RALYLQ86SE5 291 aaKnown RBP11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 FAM49AQ9H0Q0 323 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 RC3H2Q9HBD1 1191 aaKnown RBP11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 BARX2Q9UMQ3 279 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 MICAL3Q7RTP6 2002 aa11.19□□□□□ -0.62
TNFRSF9-203ENST00000492571 MAFGO15525 162 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 IBSPP21815 317 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 MGAT3Q09327 533 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 TCF15Q12870 199 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 CAMK1Q14012 370 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 GRM4Q14833 912 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 WTAPQ15007 396 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 ADGRD2Q7Z7M1 963 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 NME8Q8N427 588 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 PIBF1Q8WXW3 757 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 GPRASP2Q96D09 838 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 RRP36Q96EU6 259 aaKnown RBP11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 PRR14Q9BWN1 585 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 TLR9Q9NR96 1032 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 PADI3Q9ULW8 664 aa11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 SUPT16HQ9Y5B9 1047 aaKnown RBP11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 V9GY48 417 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF9-203ENST00000492571 MBLAC1A4D2B0 266 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 RBAK-RBAKDNI3L0D1 243 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 PER2O15055 1255 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 FECHP22830 423 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 DNAJB1P25685 340 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 KIF5BP33176 963 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 NFX1Q12986 1120 aaKnown RBP11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 MTMR1Q13613 665 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 SEC23AQ15436 765 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 PTPN21Q16825 1174 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 B4GALNT3Q6L9W6 998 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 THNSL1Q8IYQ7 743 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 CTCFLQ8NI51 663 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 RWDD1Q9H446 243 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 AGO3Q9H9G7 860 aaKnown RBP11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 FAM86C1Q9NVL1 165 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 NR2E1Q9Y466 385 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 TRPV2Q9Y5S1 764 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 KIAA1217Q5T5P2 1943 aa11.17□□□□□ -0.62
TNFRSF9-203ENST00000492571 FRMPD4Q14CM0 1322 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 DENND3A2RUS2 1198 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 SPDYE3A6NKU9 549 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 H0Y858 1186 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 PIK3CDO00329 1044 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 INSRRP14616 1297 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 HOXB8P17481 243 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 KRT76Q01546 638 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 KRT17Q04695 432 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 SEMA3FQ13275 785 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 BMS1Q14692 1282 aaKnown RBP11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 CES5AQ6NT32 575 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 USP17L6PQ6QN14 398 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 LZTS2Q9BRK4 669 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 CELF4Q9BZC1 486 aaKnown RBP11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 PSTPIP2Q9H939 334 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 C1orf112Q9NSG2 853 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 TMEM260Q9NX78 707 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 GINS2Q9Y248 185 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 PCDHA2Q9Y5H9 948 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 TRIOO75962 3097 aa11.16□□□□□ -0.62
TNFRSF9-203ENST00000492571 IGSF9BQ9UPX0 1349 aa11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 C5orf42Q9H799 3197 aa11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 GSTTP1A0A1W2PQM5 241 aa11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 TBKBP1A7MCY6 615 aa11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 GPR182O15218 404 aa11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 GPR37O15354 613 aa11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 ACTN4O43707 911 aaKnown RBP11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 CYTH3O43739 400 aa11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 FGF18O76093 207 aa11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 GLP2RO95838 553 aa11.15□□□□□ -0.62
TNFRSF9-203ENST00000492571 CFHP08603 1231 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms