RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 ZCCHC8Q6NZY4 707 aaKnown RBP4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 CEP68Q76N32 757 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 KRT26Q7Z3Y9 468 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 TAX1BP1Q86VP1 789 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 SH3RF2Q8TEC5 729 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 TRMT2BQ96GJ1 504 aaKnown RBP4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 TMEM169Q96HH4 297 aa4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 CELF4Q9BZC1 486 aaKnown RBP4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 SLKQ9H2G2 1235 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P30-201ENST00000492455 ZNF561-AS1K7EIQ3 104 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 TRAF5O00463 557 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 NKRFO15226 690 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 MYO1BO43795 1136 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 RAMP2O60895 175 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 DNAJC6O75061 913 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 CLSTN1O94985 981 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 AMY2AP04746 511 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 JMJD7P0C870 316 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 SRGAP2CP0DJJ0 459 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 PYGMP11217 842 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 AMY2BP19961 511 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 ACO1P21399 889 aaKnown RBP4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 GTF2A2P52657 109 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 TUBA3CQ13748 450 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 AGBL4Q5VU57 503 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 CDCA2Q69YH5 1023 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 CNNM4Q6P4Q7 775 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 TUBA3EQ6PEY2 450 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 TEPPQ6URK8 271 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 OVCH1Q7RTY7 1134 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 STRA8Q7Z7C7 330 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 LDLRAD3Q86YD5 345 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 UBR7Q8N806 425 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 IGSF22Q8N9C0 903 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 ZNF483Q8TF39 744 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 ORAI3Q9BRQ5 295 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 ALG1Q9BT22 464 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 SPC25Q9HBM1 224 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 DLL4Q9NR61 685 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 PCDHB4Q9Y5E5 795 aa4.17□□□□□ -1.74
HMGB1P30-201ENST00000492455 CCDC66A2RUB6 948 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 FAM47E-STBD1D6RA91 191 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 CBX4O00257 560 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 HGSO14964 777 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 KPNA6O60684 536 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 FBXO21O94952 628 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 COL6A2P12110 1019 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 RAC3P60763 192 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 PTPROQ16827 1216 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 TMEM177Q53S58 311 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 PIK3R6Q5UE93 754 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 LRCH2Q5VUJ6 765 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 CREB3L3Q68CJ9 461 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 TMC5Q6UXY8 1006 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 Q6ZUG5 572 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 C16orf59Q7L2K0 433 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 POLNQ7Z5Q5 900 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 ZC3H7AQ8IWR0 971 aaKnown RBP4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 AFAP1L2Q8N4X5 818 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 NUDT10Q8NFP7 164 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 NUDT11Q96G61 164 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 CHAMP1Q96JM3 812 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 KCNJ15Q99712 375 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 PRRX2Q99811 253 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 SMURF1Q9HCE7 757 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 PCDH12Q9NPG4 1184 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 SAMD15Q9P1V8 674 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 MAPRE3Q9UPY8 281 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 TELO2Q9Y4R8 837 aa4.16□□□□□ -1.74
HMGB1P30-201ENST00000492455 TADA3O75528 432 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 RAD17O75943 681 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 EYA4O95677 639 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 C1SP09871 688 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 PDE6AP16499 860 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 NAT1P18440 290 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 JAM2P57087 298 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 LACTBP83111 547 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 DSG1Q02413 1049 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 EMC4Q5J8M3 183 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 RNF187Q5TA31 235 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 OTOP1Q7RTM1 612 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 OTOP3Q7RTS5 596 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 RPUSD2Q8IZ73 545 aaKnown RBP4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 FUKQ8N0W3 1084 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 PPM1KQ8N3J5 372 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 CISD2Q8N5K1 135 aaKnown RBP4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 PIP4K2CQ8TBX8 421 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 FBXW5Q969U6 566 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 NEIL1Q96FI4 390 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 BRINP2Q9C0B6 783 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 EPB41L1Q9H4G0 881 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 CAAP1Q9H8G2 361 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 MMRN2Q9H8L6 949 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 REXO2Q9Y3B8 237 aaKnown RBP4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 COL4A3BPQ9Y5P4 624 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 DMRT1Q9Y5R6 373 aa4.15□□□□□ -1.75
HMGB1P30-201ENST00000492455 ZNF891A8MT65 544 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 B4E1Z4 1266 aa4.14□□□□□ -1.75
HMGB1P30-201ENST00000492455 M0R2C6 588 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms