RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 FGBP02675 491 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 CTSHP09668 335 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 PDCP20941 246 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 TECP42680 631 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 MKRN4PQ13434 485 aaPredicted RBP17.05■□□□□ 0.32
SS18L1-204ENST00000491916 CTTNQ14247 550 aaKnown RBP17.05■□□□□ 0.32
SS18L1-204ENST00000491916 RILPL1Q5EBL4 403 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 FAM109BQ6ICB4 259 aaPredicted RBP17.05■□□□□ 0.32
SS18L1-204ENST00000491916 PSRC1Q6PGN9 363 aaPredicted RBP17.05■□□□□ 0.32
SS18L1-204ENST00000491916 FERMT3Q86UX7 667 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 C4orf19Q8IY42 314 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 RPUSD2Q8IZ73 545 aaKnown RBP17.05■□□□□ 0.32
SS18L1-204ENST00000491916 SH2D3AQ9BRG2 576 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 LXNQ9BS40 222 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 NRBP2Q9NSY0 501 aa17.05■□□□□ 0.32
SS18L1-204ENST00000491916 IGKV6-21A0A0C4DH24 114 aa17.04■□□□□ 0.32
SS18L1-204ENST00000491916 VPS37CA5D8V6 355 aaPredicted RBP17.04■□□□□ 0.32
SS18L1-204ENST00000491916 LYPLA2O95372 231 aa17.04■□□□□ 0.32
SS18L1-204ENST00000491916 PARNO95453 639 aaKnown RBP17.04■□□□□ 0.32
SS18L1-204ENST00000491916 PFKMP08237 780 aa17.04■□□□□ 0.32
SS18L1-204ENST00000491916 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.32
SS18L1-204ENST00000491916 CYP4A11Q02928 519 aa17.04■□□□□ 0.32
SS18L1-204ENST00000491916 OTOP2Q7RTS6 562 aa17.04■□□□□ 0.32
SS18L1-204ENST00000491916 FAM49AQ9H0Q0 323 aaPredicted RBP17.04■□□□□ 0.32
SS18L1-204ENST00000491916 CDHR5Q9HBB8 845 aa17.04■□□□□ 0.32
SS18L1-204ENST00000491916 LOXHD1Q8IVV2 1947 aa17.04■□□□□ 0.32
SS18L1-204ENST00000491916 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 NPEPPSP55786 919 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 ATP2C1P98194 919 aaPredicted RBP17.03■□□□□ 0.32
SS18L1-204ENST00000491916 PLEKHG4Q58EX7 1191 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 PLA2G4FQ68DD2 849 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 BRAPQ7Z569 592 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 IGSF22Q8N9C0 903 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 LRCH3Q96II8 777 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 RNPC3Q96LT9 517 aaKnown RBP17.03■□□□□ 0.32
SS18L1-204ENST00000491916 CEP131Q9UPN4 1083 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 CDY2AQ9Y6F7 541 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 PTPRSQ13332 1948 aa17.03■□□□□ 0.32
SS18L1-204ENST00000491916 KDM3AQ9Y4C1 1321 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 STX6O43752 255 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 GPR32O75388 356 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 MED24O75448 989 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 PRPHP41219 470 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 CLCN3P51790 818 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 MRPS6P82932 125 aaKnown RBP17.02■□□□□ 0.32
SS18L1-204ENST00000491916 TMEM62Q0P6H9 643 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 DRP2Q13474 957 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 LPIN1Q14693 890 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 ECM1Q16610 540 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 FAM173BQ6P4H8 233 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 CATSPER3Q86XQ3 398 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 TPH2Q8IWU9 490 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 NME8Q8N427 588 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 ZSWIM4Q9H7M6 989 aa17.02■□□□□ 0.32
SS18L1-204ENST00000491916 SEPT9Q9UHD8 586 aaPredicted RBP17.02■□□□□ 0.32
SS18L1-204ENST00000491916 A0A087WWV3 80 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 LAD1O00515 517 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 MAGEB2O15479 319 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 YWHABP31946 246 aaKnown RBP17.01■□□□□ 0.31
SS18L1-204ENST00000491916 PDIA5Q14554 519 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 MTERF2Q49AM1 385 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 FBXO47Q5MNV8 452 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 EFCAB12Q6NXP0 572 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 CNKSR3Q6P9H4 555 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 LRRC71Q8N4P6 559 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 DBF4BQ8NFT6 615 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 NEK9Q8TD19 979 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 MMTAG2Q9BU76 263 aaKnown RBP17.01■□□□□ 0.31
SS18L1-204ENST00000491916 POLR3CQ9BUI4 534 aaPredicted RBP17.01■□□□□ 0.31
SS18L1-204ENST00000491916 FTOQ9C0B1 505 aaKnown RBP eCLIP17.01■□□□□ 0.31
SS18L1-204ENST00000491916 AGO3Q9H9G7 860 aaKnown RBP17.01■□□□□ 0.31
SS18L1-204ENST00000491916 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
SS18L1-204ENST00000491916 ARID2Q68CP9 1835 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 GRXCR1A8MXD5 290 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 MAFO75444 373 aaPredicted RBP17■□□□□ 0.31
SS18L1-204ENST00000491916 VTNP04004 478 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 RPLP2P05387 115 aaKnown RBP17■□□□□ 0.31
SS18L1-204ENST00000491916 GHRP10912 638 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 RPA1P27694 616 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 PKP1Q13835 747 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 PTPAQ15257 358 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 MICAL3Q7RTP6 2002 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 RSPH3Q86UC2 560 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 SPRYD3Q8NCJ5 442 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 TMEM40Q8WWA1 233 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 CELF4Q9BZC1 486 aaKnown RBP17■□□□□ 0.31
SS18L1-204ENST00000491916 ADAMTS10Q9H324 1103 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 DHX33Q9H6R0 707 aaKnown RBP17■□□□□ 0.31
SS18L1-204ENST00000491916 TUFT1Q9NNX1 390 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 TRPV2Q9Y5S1 764 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 CLIC4Q9Y696 253 aa17■□□□□ 0.31
SS18L1-204ENST00000491916 PP2D1A8MPX8 630 aa16.99■□□□□ 0.31
SS18L1-204ENST00000491916 DKC1O60832 514 aaKnown RBP eCLIP16.99■□□□□ 0.31
SS18L1-204ENST00000491916 TBC1D8BQ0IIM8 1120 aa16.99■□□□□ 0.31
SS18L1-204ENST00000491916 IER5Q5VY09 327 aa16.99■□□□□ 0.31
SS18L1-204ENST00000491916 METTL13Q8N6R0 699 aa16.99■□□□□ 0.31
SS18L1-204ENST00000491916 CEP170P1Q96L14 293 aa16.99■□□□□ 0.31
SS18L1-204ENST00000491916 SQORQ9Y6N5 450 aa16.99■□□□□ 0.31
SS18L1-204ENST00000491916 BAIAP3O94812 1187 aa16.98■□□□□ 0.31
SS18L1-204ENST00000491916 XRCC6P12956 609 aaKnown RBP eCLIP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms