RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 EDRF1Q3B7T1 1238 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 FOXR2Q6PJQ5 311 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 PODNQ7Z5L7 613 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 APBB1IPQ7Z5R6 666 aaPredicted RBP11.71□□□□□ -0.54
SNED1-211ENST00000491761 SFR1Q86XK3 245 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 MYCT1Q8N699 235 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 CAPS2Q9BXY5 557 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 IQCGQ9H095 443 aaKnown RBP11.71□□□□□ -0.54
SNED1-211ENST00000491761 MYO1CO00159 1063 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 SPOPO43791 374 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 CYP11B2P19099 503 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 GUCY2DQ02846 1103 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 KNOP1Q1ED39 458 aaKnown RBP11.71□□□□□ -0.54
SNED1-211ENST00000491761 C10orf76Q5T2E6 689 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 DNAJC19Q96DA6 116 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 FAM20AQ96MK3 541 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 PURBQ96QR8 312 aaKnown RBP11.71□□□□□ -0.54
SNED1-211ENST00000491761 LRRC4BQ9NT99 713 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 PLIN4Q96Q06 1357 aa11.71□□□□□ -0.54
SNED1-211ENST00000491761 F5H6K3 240 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 ZNF263O14978 683 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 PRPF6O94906 941 aaKnown RBP11.7□□□□□ -0.54
SNED1-211ENST00000491761 BMP3P12645 472 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 KLRC3Q07444 240 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 SLC18A3Q16572 532 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 CCDC63Q8NA47 563 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 MYH8P13535 1937 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 PITPNM2Q9BZ72 1349 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 KCNK3O14649 394 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 RAD17O75943 681 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 ITIH3Q06033 890 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 NFIAQ12857 509 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 CAPN12Q6ZSI9 719 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 VSIG1Q86XK7 387 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 CREG2Q8IUH2 290 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 TPH2Q8IWU9 490 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 BAP1Q92560 729 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 CNKSR1Q969H4 720 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 SPON1Q9HCB6 807 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 IGKV6D-41A0A0C4DH26 115 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 PJA2O43164 708 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 HEXIM1O94992 359 aaKnown RBP11.7□□□□□ -0.54
SNED1-211ENST00000491761 CFBP00751 764 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 DDR1Q08345 913 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 DLGAP5Q15398 846 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 TRIM68Q6AZZ1 485 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 MYCBPQ99417 103 aaPredicted RBP11.7□□□□□ -0.54
SNED1-211ENST00000491761 KRT12Q99456 494 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 EHD4Q9H223 541 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 BHMT2Q9H2M3 363 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 ARHGEF10LQ9HCE6 1279 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 RASAL2Q9UJF2 1139 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 CEP83Q9Y592 693 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 RREB1Q92766 1687 aa11.7□□□□□ -0.54
SNED1-211ENST00000491761 TBX3O15119 743 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 PPP1R11O60927 126 aaPredicted RBP11.69□□□□□ -0.54
SNED1-211ENST00000491761 GAP43P17677 238 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 CTNNA1P35221 906 aaKnown RBP11.69□□□□□ -0.54
SNED1-211ENST00000491761 ALS2CLQ60I27 953 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 FRMD5Q7Z6J6 570 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 TRIM59Q8IWR1 403 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 CCDC77Q9BR77 488 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 EPB41L5Q9HCM4 733 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 MTRF1LQ9UGC7 380 aaKnown RBP11.69□□□□□ -0.54
SNED1-211ENST00000491761 MED24O75448 989 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 H2AFZP0C0S5 128 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 ECM1Q16610 540 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 MOXD1Q6UVY6 613 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 H2AFVQ71UI9 128 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 CERS5Q8N5B7 392 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 SCFD1Q8WVM8 642 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 SYNCQ9H7C4 482 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 SMARCAL1Q9NZC9 954 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 FRMD4BQ9Y2L6 1034 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 MAST2Q6P0Q8 1798 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
SNED1-211ENST00000491761 C21orf2O43822 256 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 HOXA13P31271 388 aaPredicted RBP11.69□□□□□ -0.54
SNED1-211ENST00000491761 NAB2Q15742 525 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 ARHGAP44Q17R89 818 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 PEX26Q7Z412 305 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 MASTLQ96GX5 879 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 SPATA31A6Q5VVP1 1343 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 LAMB1P07942 1786 aa11.69□□□□□ -0.54
SNED1-211ENST00000491761 A6NNZ2 444 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 NOVP48745 357 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 AARSP49588 968 aaKnown RBP eCLIP11.68□□□□□ -0.54
SNED1-211ENST00000491761 KCNMA1Q12791 1236 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 TUBB8Q3ZCM7 444 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 INTS8Q75QN2 995 aaKnown RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 CATSPER3Q86XQ3 398 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 RIN2Q8WYP3 895 aaPredicted RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 JPH2Q9BR39 696 aaPredicted RBP11.68□□□□□ -0.54
SNED1-211ENST00000491761 PDXKO00764 312 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 TRIM66O15016 1216 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 CLIC2O15247 247 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 NR3C1P04150 777 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 STAT1P42224 750 aa11.68□□□□□ -0.54
SNED1-211ENST00000491761 LACTBP83111 547 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms