RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 MARK3P27448 753 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 GJA8P48165 433 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 RARRES1P49788 294 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 IRX5P78411 483 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-221ENST00000489562 AMPD3Q01432 767 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 KIAA0753Q2KHM9 967 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 ZNF484Q5JVG2 852 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 CXCL17Q6UXB2 119 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 KRBA2Q6ZNG9 492 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 ANO5Q75V66 913 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 SV2BQ7L1I2 683 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 KCNK18Q7Z418 384 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 ELOA2Q8IYF1 753 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-221ENST00000489562 SYT2Q8N9I0 419 aaPredicted RBP15.48■□□□□ 0.07
C9orf3-221ENST00000489562 ANKLE1Q8NAG6 615 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 CNNM3Q8NE01 707 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 PIGOQ8TEQ8 1089 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 GLT1D1Q96MS3 346 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 BHMT2Q9H2M3 363 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 DACT1Q9NYF0 836 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 HOOK1Q9UJC3 728 aaKnown RBP15.48■□□□□ 0.07
C9orf3-221ENST00000489562 PHF24Q9UPV7 400 aa15.48■□□□□ 0.07
C9orf3-221ENST00000489562 TFRCP02786 760 aaKnown RBP15.47■□□□□ 0.07
C9orf3-221ENST00000489562 MYL1P05976 194 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 PSMC6P62333 389 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 LONRF3Q496Y0 759 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 XKR9Q5GH70 373 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 GPT2Q8TD30 523 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 CEP170P1Q96L14 293 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 JPH2Q9BR39 696 aaPredicted RBP15.47■□□□□ 0.07
C9orf3-221ENST00000489562 RNPEPQ9H4A4 650 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 CYP26B1Q9NR63 512 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 KBTBD4Q9NVX7 518 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 SERTAD1Q9UHV2 236 aa15.47■□□□□ 0.07
C9orf3-221ENST00000489562 NRCAMQ92823 1304 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 RRN3P2A6NIE6 340 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 DGAT1O75907 488 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 GNAT1P11488 350 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 RFC5P40937 340 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 SLC12A3P55017 1021 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 PPFIA1Q13136 1202 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 MCM6Q14566 821 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 TARBP2Q15633 366 aaKnown RBP15.46■□□□□ 0.07
C9orf3-221ENST00000489562 KLHL40Q2TBA0 621 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 PLA2G4FQ68DD2 849 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 LRRC15Q8TF66 581 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 SYAP1Q96A49 352 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-221ENST00000489562 TIPINQ9BVW5 301 aa15.46■□□□□ 0.07
C9orf3-221ENST00000489562 BMP2KQ9NSY1 1161 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-221ENST00000489562 A0A1W2PQ45 241 aaPredicted RBP15.45■□□□□ 0.06
C9orf3-221ENST00000489562 A0A1W2PQY0 241 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 ZBTB39O15060 712 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 MAGEB2O15479 319 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 GAS2O43903 313 aaKnown RBP15.45■□□□□ 0.06
C9orf3-221ENST00000489562 SSBP05455 408 aaKnown RBP eCLIP15.45■□□□□ 0.06
C9orf3-221ENST00000489562 SMIM10L2AP0DMW4 78 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 SMIM10L2BP0DMW5 78 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 INSRRP14616 1297 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 PTPN11Q06124 597 aaPredicted RBP15.45■□□□□ 0.06
C9orf3-221ENST00000489562 MTERF2Q49AM1 385 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 NFRKBQ6P4R8 1299 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 PADI6Q6TGC4 694 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 TRMT1LQ7Z2T5 733 aaKnown RBP15.45■□□□□ 0.06
C9orf3-221ENST00000489562 SH3RF1Q7Z6J0 888 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 SESTD1Q86VW0 696 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 C7orf31Q8N865 590 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 MCPH1Q8NEM0 835 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 SLC7A3Q8WY07 619 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 STARD7Q9NQZ5 370 aa15.45■□□□□ 0.06
C9orf3-221ENST00000489562 A0A0U1RQG5 324 aaPredicted RBP15.44■□□□□ 0.06
C9orf3-221ENST00000489562 GUCY2CP25092 1073 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 NPEPPSP55786 919 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 TBC1D8BQ0IIM8 1120 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 GRIK4Q16099 956 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 NBPF20Q3BBV1 942 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 RINT1Q6NUQ1 792 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 CNNM4Q6P4Q7 775 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 GPBP1Q86WP2 473 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 VTI1AQ96AJ9 217 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 PAGE5Q96GU1 130 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 NUP62CLQ9H1M0 184 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 CLSTN2Q9H4D0 955 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 DHX33Q9H6R0 707 aaKnown RBP15.44■□□□□ 0.06
C9orf3-221ENST00000489562 ATP6V0A4Q9HBG4 840 aa15.44■□□□□ 0.06
C9orf3-221ENST00000489562 CENPFP49454 3210 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 A0A087WWV3 80 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 C17orf102A2RUQ5 167 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 TMEM150BA6NC51 233 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 ZBTB42B2RXF5 422 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 GTPBP6O43824 516 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-221ENST00000489562 USO1O60763 962 aaKnown RBP15.43■□□□□ 0.06
C9orf3-221ENST00000489562 CYP11B2P19099 503 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 HOXC8P31273 242 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 POLGP54098 1239 aaPredicted RBP15.43■□□□□ 0.06
C9orf3-221ENST00000489562 CHMP4BP1P59074 171 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 ITGA7Q13683 1181 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 DHX8Q14562 1220 aaKnown RBP15.43■□□□□ 0.06
C9orf3-221ENST00000489562 POSTNQ15063 836 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 C1orf186Q6ZWK4 172 aa15.43■□□□□ 0.06
C9orf3-221ENST00000489562 RETREG2Q8NC44 543 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms