RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 TMOD4Q9NZQ9 345 aa14.24□□□□□ -0.13
ABCA2-219ENST00000488535 TAF1P21675 1872 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 DNAJC8O75937 253 aaPredicted RBP14.23□□□□□ -0.13
ABCA2-219ENST00000488535 SNUPNO95149 360 aaKnown RBP14.23□□□□□ -0.13
ABCA2-219ENST00000488535 NEFHP12036 1026 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 RBM5P52756 815 aaKnown RBP eCLIP14.23□□□□□ -0.13
ABCA2-219ENST00000488535 LONRF1Q17RB8 773 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 MIS18BP1Q6P0N0 1132 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 ETAA1Q9NY74 926 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 SAP30BPQ9UHR5 308 aaKnown RBP14.23□□□□□ -0.13
ABCA2-219ENST00000488535 MYMKA6NI61 221 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 CALML3P27482 149 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 RAD23BP54727 409 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 SEMA3FQ13275 785 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 RNF10Q8N5U6 811 aaKnown RBP14.23□□□□□ -0.13
ABCA2-219ENST00000488535 INTUQ9ULD6 942 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 ATP6V0A2Q9Y487 856 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 H0YGN5 161 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 KIF3CO14782 793 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 CREB1P16220 341 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 FUT2Q10981 343 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 ALKBH5Q6P6C2 394 aaKnown RBP14.23□□□□□ -0.13
ABCA2-219ENST00000488535 GJB7Q6PEY0 223 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 C3orf20Q8ND61 904 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 KBTBD4Q9NVX7 518 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 NFS1Q9Y697 457 aa14.23□□□□□ -0.13
ABCA2-219ENST00000488535 SPDYE5A6NIY4 337 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 PLCG2P16885 1265 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 GNAT2P19087 354 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 GRIK3Q13003 919 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 SLC18A3Q16572 532 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 ERMARDQ5T6L9 678 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 RFX8Q6ZV50 586 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 MREGQ8N565 214 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 FBXO25Q8TCJ0 367 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 NEK9Q8TD19 979 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 SNX29Q8TEQ0 813 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 FBF1Q8TES7 1133 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 TNFRSF25Q93038 417 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 SEMA4AQ9H3S1 761 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 RNF14Q9UBS8 474 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 ZMYND8Q9ULU4 1186 aaPredicted RBP14.22□□□□□ -0.13
ABCA2-219ENST00000488535 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
ABCA2-219ENST00000488535 NPHP3-ACAD11A0A0J9YXS1 232 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 LRRD1A4D1F6 860 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 USP17L3A6NCW0 530 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 USP17L4A6NCW7 530 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 OR52Z1P0C646 297 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 SLC9A1P19634 815 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 ECHS1P30084 290 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 PMS2P54278 862 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 INHBEP58166 350 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 KCNMA1Q12791 1236 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 CCDC6Q16204 474 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 HGSNATQ68CP4 663 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 LRIG3Q6UXM1 1119 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 USP17L1Q7RTZ2 530 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 OSGEPQ9NPF4 335 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 PCDHA4Q9UN74 947 aa14.22□□□□□ -0.13
ABCA2-219ENST00000488535 A0A1W2PQJ5 194 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 DPPA5A6NC42 116 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 LDHBP07195 334 aaKnown RBP14.21□□□□□ -0.13
ABCA2-219ENST00000488535 GYS1P13807 737 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 TNFRSF8P28908 595 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 MSH2P43246 934 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 DR1Q01658 176 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 TFAP4Q01664 338 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 PFKFB3Q16875 520 aaPredicted RBP14.21□□□□□ -0.13
ABCA2-219ENST00000488535 EAPPQ56P03 285 aaPredicted RBP14.21□□□□□ -0.13
ABCA2-219ENST00000488535 CAPN12Q6ZSI9 719 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 ARMC9Q7Z3E5 817 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 DYNLL2Q96FJ2 89 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.21□□□□□ -0.132e-6■■□□□ 13.8
ABCA2-219ENST00000488535 PAPOLBQ9NRJ5 636 aaKnown RBP14.21□□□□□ -0.13
ABCA2-219ENST00000488535 DAAM1Q9Y4D1 1078 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 PCNTO95613 3336 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 USP17L8P0C7I0 530 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 TRIP13Q15645 432 aaPredicted RBP14.21□□□□□ -0.13
ABCA2-219ENST00000488535 ALX1Q15699 326 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 SLC10A5Q5PT55 438 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 ARL6IP4Q66PJ3 421 aaKnown RBP14.21□□□□□ -0.13
ABCA2-219ENST00000488535 ZNF662Q6ZS27 426 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 RUBCNQ92622 972 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 DDX12PQ92771 950 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 PAGR1Q9BTK6 254 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 BATF3Q9NR55 127 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 TMEM260Q9NX78 707 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 DLGAP2Q9P1A6 1054 aa14.21□□□□□ -0.13
ABCA2-219ENST00000488535 A0A1B0GVG6 124 aa14.21□□□□□ -0.14
ABCA2-219ENST00000488535 NCALDP61601 193 aa14.21□□□□□ -0.14
ABCA2-219ENST00000488535 GRIK5Q16478 980 aa14.21□□□□□ -0.14
ABCA2-219ENST00000488535 HERC4Q5GLZ8 1057 aaPredicted RBP14.21□□□□□ -0.14
ABCA2-219ENST00000488535 CRNKL1Q9BZJ0 848 aaKnown RBP14.21□□□□□ -0.14
ABCA2-219ENST00000488535 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.21□□□□□ -0.14
ABCA2-219ENST00000488535 SMNDC1O75940 238 aaKnown RBP eCLIP14.2□□□□□ -0.14
ABCA2-219ENST00000488535 CALM1P0DP23 149 aa14.2□□□□□ -0.14
ABCA2-219ENST00000488535 CALM2P0DP24 149 aa14.2□□□□□ -0.14
ABCA2-219ENST00000488535 CALM3P0DP25 149 aa14.2□□□□□ -0.14
ABCA2-219ENST00000488535 ATP4AP20648 1035 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms