RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZSWIM4Q9H7M6 989 aa12.37□□□□□ -0.43
UBE4B-210ENST00000488228 BMP2KQ9NSY1 1161 aaPredicted RBP12.37□□□□□ -0.43
UBE4B-210ENST00000488228 GBF1Q92538 1859 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 RRN3P2A6NIE6 340 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 GNAT1P11488 350 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 RAG1P15918 1043 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 NUCB2P80303 420 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
UBE4B-210ENST00000488228 PTK7Q13308 1070 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 SLC39A14Q15043 492 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 ZNF484Q5JVG2 852 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 SPECC1Q5M775 1068 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 MTHFD1LQ6UB35 978 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 C4orf19Q8IY42 314 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 LINC00301Q8NCQ3 95 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 PIGOQ8TEQ8 1089 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 POLR3CQ9BUI4 534 aaPredicted RBP12.36□□□□□ -0.43
UBE4B-210ENST00000488228 CSRNP2Q9H175 543 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 TRIOBPQ9H2D6 2365 aa12.36□□□□□ -0.43
UBE4B-210ENST00000488228 SPTLC2O15270 562 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 DKC1O60832 514 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■■■■ 36.2
UBE4B-210ENST00000488228 LYPLA2O95372 231 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 YEATS4O95619 227 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 KLRC1P26715 233 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 RPA1P27694 616 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 THPOP40225 353 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 MAGEA10P43363 369 aaPredicted RBP12.35□□□□□ -0.43
UBE4B-210ENST00000488228 CLCN3P51790 818 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 CCL23P55773 120 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 TBC1D8BQ0IIM8 1120 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 TMEM62Q0P6H9 643 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 PDIA5Q14554 519 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 TARBP2Q15633 366 aaKnown RBP12.35□□□□□ -0.43
UBE4B-210ENST00000488228 XKR9Q5GH70 373 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 KRT79Q5XKE5 535 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 USP49Q70CQ1 688 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 CABP7Q86V35 215 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 LRRC71Q8N4P6 559 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 CCDC155Q8N6L0 562 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 KRI1Q8N9T8 703 aaKnown RBP12.35□□□□□ -0.43
UBE4B-210ENST00000488228 CAGE1Q8TC20 777 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 DNAJB3Q8WWF6 145 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 BADQ92934 168 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 SCLYQ96I15 445 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 CCDC43Q96MW1 224 aaKnown RBP12.35□□□□□ -0.43
UBE4B-210ENST00000488228 CEP89Q96ST8 783 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 PPP1R16BQ96T49 567 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 PLIN2Q99541 437 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 NIFKQ9BYG3 293 aaKnown RBP12.35□□□□□ -0.43
UBE4B-210ENST00000488228 CYP26B1Q9NR63 512 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 NRBP2Q9NSY0 501 aa12.35□□□□□ -0.43
UBE4B-210ENST00000488228 DDX19AQ9NUU7 478 aaKnown RBP12.35□□□□□ -0.43
UBE4B-210ENST00000488228 RANBP2P49792 3224 aaKnown RBP12.35□□□□□ -0.43
UBE4B-210ENST00000488228 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 TIMP1P01033 207 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 CKBP12277 381 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 LONP1P36776 959 aaKnown RBP12.34□□□□□ -0.43
UBE4B-210ENST00000488228 KRT85P78386 507 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 RBL2Q08999 1139 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 GRB10Q13322 594 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 DRP2Q13474 957 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 BFSP2Q13515 415 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 EMC2Q15006 297 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 ZNF618Q5T7W0 954 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 TAF2Q6P1X5 1199 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 TRAF7Q6Q0C0 670 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 LRRC8DQ7L1W4 858 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 KCNK18Q7Z418 384 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 METTL13Q8N6R0 699 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 LRRC15Q8TF66 581 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 SYMPKQ92797 1274 aaKnown RBP12.34□□□□□ -0.43
UBE4B-210ENST00000488228 TNPO1Q92973 898 aaKnown RBP12.34□□□□□ -0.43
UBE4B-210ENST00000488228 EPSTI1Q96J88 318 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 CEP170P1Q96L14 293 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 AK8Q96MA6 479 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 PNMA5Q96PV4 448 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
UBE4B-210ENST00000488228 KIAA1024Q9UPX6 916 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 PCDHA2Q9Y5H9 948 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 SRPRBQ9Y5M8 271 aaKnown RBP12.34□□□□□ -0.43
UBE4B-210ENST00000488228 MORC2Q9Y6X9 1032 aaPredicted RBP12.34□□□□□ -0.43
UBE4B-210ENST00000488228 KDM3AQ9Y4C1 1321 aa12.34□□□□□ -0.43
UBE4B-210ENST00000488228 E9PMD0 336 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 USO1O60763 962 aaKnown RBP12.33□□□□□ -0.44
UBE4B-210ENST00000488228 PPP6R2O75170 966 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 CSF2RAP15509 400 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 SELPP16109 830 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 UBA7P41226 1012 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 RARRES1P49788 294 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 POLGP54098 1239 aaPredicted RBP12.33□□□□□ -0.44
UBE4B-210ENST00000488228 MRPS6P82932 125 aaKnown RBP12.33□□□□□ -0.44
UBE4B-210ENST00000488228 MBTPS1Q14703 1052 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 KARSQ15046 597 aaKnown RBP12.33□□□□□ -0.44
UBE4B-210ENST00000488228 TMEM119Q4V9L6 283 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 ATL3Q6DD88 541 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 LINC01465Q8N7H1 131 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 RASSF8Q8NHQ8 419 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 KCNG4Q8TDN1 519 aa12.33□□□□□ -0.44
UBE4B-210ENST00000488228 LEO1Q8WVC0 666 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms