RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FAM13AO94988 1023 aa28.6■■■□□ 2.17
HLA-C-208ENST00000487245 EPHB4P54760 987 aa28.6■■■□□ 2.17
HLA-C-208ENST00000487245 NFIL3Q16649 462 aa28.6■■■□□ 2.17
HLA-C-208ENST00000487245 NIM1KQ8IY84 436 aa28.6■■■□□ 2.17
HLA-C-208ENST00000487245 ANKRD13CQ8N6S4 541 aa28.6■■■□□ 2.17
HLA-C-208ENST00000487245 DYDC2Q96IM9 177 aa28.6■■■□□ 2.17
HLA-C-208ENST00000487245 KCND2Q9NZV8 630 aa28.6■■■□□ 2.17
HLA-C-208ENST00000487245 NCK2O43639 380 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 ASNSP08243 561 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 EPB41P11171 864 aaKnown RBP28.59■■■□□ 2.17
HLA-C-208ENST00000487245 ANXA13P27216 316 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 NNTQ13423 1086 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 TPH2Q8IWU9 490 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 GSPT2Q8IYD1 628 aaKnown RBP28.59■■■□□ 2.17
HLA-C-208ENST00000487245 CAVIN3Q969G5 261 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 NACC1Q96RE7 527 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 ZBTB12Q9Y330 459 aaPredicted RBP28.59■■■□□ 2.17
HLA-C-208ENST00000487245 BZW2Q9Y6E2 419 aaKnown RBP28.59■■■□□ 2.17
HLA-C-208ENST00000487245 UBE4BO95155 1302 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 PHACTR2O75167 634 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 GCNT3O95395 438 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 NR3C1P04150 777 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 GGCXP38435 758 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 KLHL30Q0D2K2 578 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 RAPGEF1Q13905 1077 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 CTTNQ14247 550 aaKnown RBP28.59■■■□□ 2.17
HLA-C-208ENST00000487245 EPHA7Q15375 998 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 C1orf186Q6ZWK4 172 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 LDHDQ86WU2 507 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 HDAC7Q8WUI4 952 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 TMEM39BQ9GZU3 492 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 FBXL5Q9UKA1 691 aa28.59■■■□□ 2.17
HLA-C-208ENST00000487245 RSPH10B2B2RC85 870 aa28.58■■■□□ 2.17
HLA-C-208ENST00000487245 CES2O00748 559 aa28.58■■■□□ 2.17
HLA-C-208ENST00000487245 BUB1O43683 1085 aa28.58■■■□□ 2.17
HLA-C-208ENST00000487245 RSPH10BP0C881 870 aa28.58■■■□□ 2.17
HLA-C-208ENST00000487245 XRCC5P13010 732 aaKnown RBP28.58■■■□□ 2.17
HLA-C-208ENST00000487245 MEI1Q5TIA1 1274 aa28.58■■■□□ 2.17
HLA-C-208ENST00000487245 STXBP4Q6ZWJ1 553 aa28.58■■■□□ 2.17
HLA-C-208ENST00000487245 ZBED3Q96IU2 234 aaPredicted RBP28.58■■■□□ 2.17
HLA-C-208ENST00000487245 A0A087X0T9 212 aa28.57■■■□□ 2.16
HLA-C-208ENST00000487245 FAM228BP0C875 321 aa28.57■■■□□ 2.16
HLA-C-208ENST00000487245 TEKT3Q9BXF9 490 aa28.57■■■□□ 2.16
HLA-C-208ENST00000487245 GOLGA6BA6NDN3 693 aa28.57■■■□□ 2.16
HLA-C-208ENST00000487245 PALMO75781 387 aa28.57■■■□□ 2.16
HLA-C-208ENST00000487245 NEK9Q8TD19 979 aa28.57■■■□□ 2.16
HLA-C-208ENST00000487245 ZNF577Q9BSK1 485 aa28.57■■■□□ 2.16
HLA-C-208ENST00000487245 PGAP2Q9UHJ9 254 aa28.57■■■□□ 2.16
HLA-C-208ENST00000487245 SMCHD1A6NHR9 2005 aa28.57■■■□□ 2.16
HLA-C-208ENST00000487245 ASTN1O14525 1302 aa28.56■■■□□ 2.16
HLA-C-208ENST00000487245 KLRC1P26715 233 aa28.56■■■□□ 2.16
HLA-C-208ENST00000487245 CXCR5P32302 372 aa28.56■■■□□ 2.16
HLA-C-208ENST00000487245 PTGER2P43116 358 aa28.56■■■□□ 2.16
HLA-C-208ENST00000487245 C8orf74Q6P047 294 aa28.56■■■□□ 2.16
HLA-C-208ENST00000487245 SND1Q7KZF4 910 aaKnown RBP eCLIP28.56■■■□□ 2.162e-9■■■■□ 20.1
HLA-C-208ENST00000487245 RIT2Q99578 217 aa28.56■■■□□ 2.16
HLA-C-208ENST00000487245 SH3GL2Q99962 352 aa28.56■■■□□ 2.16
HLA-C-208ENST00000487245 PARVGQ9HBI0 331 aa28.56■■■□□ 2.16
HLA-C-208ENST00000487245 RBM12Q9NTZ6 932 aaKnown RBP28.56■■■□□ 2.16
HLA-C-208ENST00000487245 ODF2LQ9ULJ1 636 aa28.56■■■□□ 2.16
HLA-C-208ENST00000487245 DPEP1P16444 411 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 KCNA3P22001 575 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 PRKCIP41743 596 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 SF3B2Q13435 895 aaKnown RBP28.55■■■□□ 2.16
HLA-C-208ENST00000487245 EXOC3L4Q17RC7 722 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 ALS2CLQ60I27 953 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 MIGA2Q7L4E1 593 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 IRF2BP2Q7Z5L9 587 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 MYCT1Q8N699 235 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 PIGOQ8TEQ8 1089 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 FRMPD4Q14CM0 1322 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 ICAM1P05362 532 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 HSD17B4P51659 736 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 NAP1L1P55209 391 aaKnown RBP28.55■■■□□ 2.16
HLA-C-208ENST00000487245 ZYXQ15942 572 aaKnown RBP28.55■■■□□ 2.16
HLA-C-208ENST00000487245 GPIHBP1Q8IV16 184 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 FAM133AQ8N9E0 248 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 GDF3Q9NR23 364 aa28.55■■■□□ 2.16
HLA-C-208ENST00000487245 COL4A5P29400 1685 aa28.54■■■□□ 2.16
HLA-C-208ENST00000487245 SHTN1A0MZ66 631 aa28.54■■■□□ 2.16
HLA-C-208ENST00000487245 GTPBP10A4D1E9 387 aaKnown RBP28.54■■■□□ 2.16
HLA-C-208ENST00000487245 CHMP2AO43633 222 aa28.54■■■□□ 2.16
HLA-C-208ENST00000487245 AKAP3O75969 853 aa28.54■■■□□ 2.16
HLA-C-208ENST00000487245 BCRP11274 1271 aa28.54■■■□□ 2.16
HLA-C-208ENST00000487245 GBP6Q6ZN66 633 aa28.54■■■□□ 2.16
HLA-C-208ENST00000487245 NIPA1Q7RTP0 329 aa28.54■■■□□ 2.16
HLA-C-208ENST00000487245 MXRA8Q9BRK3 442 aa28.54■■■□□ 2.16
HLA-C-208ENST00000487245 GINM1Q9NU53 330 aa28.54■■■□□ 2.16
HLA-C-208ENST00000487245 PPP1R12BO60237 982 aaPredicted RBP28.53■■■□□ 2.16
HLA-C-208ENST00000487245 ZNF131P52739 623 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 APBA1Q02410 837 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 KIAA0753Q2KHM9 967 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 B3GNT9Q6UX72 402 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 INPP4AQ96PE3 977 aaPredicted RBP28.53■■■□□ 2.16
HLA-C-208ENST00000487245 MKNK1Q9BUB5 465 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 TSPYL1Q9H0U9 437 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 SMARCAL1Q9NZC9 954 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 EHD2Q9NZN4 543 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 GOLGA8KD6RF30 607 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 SHOX2O60902 331 aaPredicted RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms