RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 NAP1L5Q96NT1 182 aaPredicted RBP7.8□□□□□ -1.16
SF3A3-206ENST00000487062 DUSP9Q99956 384 aaKnown RBP7.8□□□□□ -1.16
SF3A3-206ENST00000487062 RUSC1Q9BVN2 902 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 PARVGQ9HBI0 331 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 JPH1Q9HDC5 661 aaPredicted RBP7.8□□□□□ -1.16
SF3A3-206ENST00000487062 TXNRD2Q9NNW7 524 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 ZCCHC17Q9NP64 241 aaKnown RBP7.8□□□□□ -1.16
SF3A3-206ENST00000487062 OLFML3Q9NRN5 406 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 MORF4L1Q9UBU8 362 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 UBE4BO95155 1302 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 DNAJC25-GNG10A0A024R161 153 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 LRRC10BA6NIK2 292 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 EIF3DO15371 548 aaKnown RBP eCLIP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 COBLO75128 1261 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 RGS20O76081 388 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 GNA14O95837 355 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 CCNE2O96020 404 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 SFPQP23246 707 aaKnown RBP eCLIP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 YWHABP31946 246 aaKnown RBP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 TIE1P35590 1138 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 MTIF2P46199 727 aaKnown RBP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 RARRES1P49788 294 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 ZNF157P51786 506 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 PMS1P54277 932 aaKnown RBP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 ACTR2P61160 394 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 FKBP3Q00688 224 aaKnown RBP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 KRT31Q15323 416 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 LRRC41Q15345 812 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 CCDC144BQ3MJ40 725 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 XKR9Q5GH70 373 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 CST9Q5W186 159 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 SPECC1LQ69YQ0 1117 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 PPFIBP1Q86W92 1011 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 MYCT1Q8N699 235 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 ANKRD13CQ8N6S4 541 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 MS4A3Q96HJ5 214 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 CEP63Q96MT8 703 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 SEMA6BQ9H3T3 888 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 MRPL44Q9H9J2 332 aaKnown RBP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 TBC1D7Q9P0N9 293 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 LARSQ9P2J5 1176 aaKnown RBP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 WRAP73Q9P2S5 460 aaPredicted RBP7.79□□□□□ -1.16
SF3A3-206ENST00000487062 NRBP1Q9UHY1 535 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 PCDHA2Q9Y5H9 948 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 MCM3APO60318 1980 aa7.79□□□□□ -1.16
SF3A3-206ENST00000487062 ZNF236Q9UL36 1845 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 TTLL13PA6NNM8 815 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 PES1O00541 588 aaKnown RBP7.78□□□□□ -1.16
SF3A3-206ENST00000487062 PDXKO00764 312 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 BACH1O14867 736 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 ZBTB39O15060 712 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 CALUO43852 315 aaPredicted RBP7.78□□□□□ -1.16
SF3A3-206ENST00000487062 ZNF500O60304 480 aaPredicted RBP7.78□□□□□ -1.16
SF3A3-206ENST00000487062 HIP1RO75146 1068 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 ATG7O95352 703 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 GCNT3O95395 438 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 PGK2P07205 417 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 SUPT20HL2P0C7V6 817 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 MAPTP10636 758 aaKnown RBP7.78□□□□□ -1.16
SF3A3-206ENST00000487062 MAPK4P31152 587 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 DNM2P50570 870 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 ZNF131P52739 623 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 INHBEP58166 350 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 ALCAMQ13740 583 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 TRIM14Q14142 442 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 KNOP1Q1ED39 458 aaKnown RBP7.78□□□□□ -1.16
SF3A3-206ENST00000487062 BMT2Q1RMZ1 405 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 FAM110CQ1W6H9 321 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 EDRF1Q3B7T1 1238 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 FAM160B1Q5W0V3 765 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 SWSAP1Q6NVH7 229 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 RGMBQ6NW40 437 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 ABHD15Q6UXT9 468 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 CYFIP1Q7L576 1253 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 APTXQ7Z2E3 356 aaKnown RBP7.78□□□□□ -1.16
SF3A3-206ENST00000487062 RASAL3Q86YV0 1011 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 IRF2BP1Q8IU81 584 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 LRRC8AQ8IWT6 810 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 FAM178BQ8IXR5 827 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 SLC17A8Q8NDX2 589 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 CCDC112Q8NEF3 446 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 MORC4Q8TE76 937 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 POM121Q96HA1 1249 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 CNOT6LQ96LI5 555 aaKnown RBP7.78□□□□□ -1.16
SF3A3-206ENST00000487062 DRC1Q96MC2 740 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 ZNF830Q96NB3 372 aaPredicted RBP7.78□□□□□ -1.16
SF3A3-206ENST00000487062 TUBGCP2Q9BSJ2 902 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 TMEM121BQ9BXQ6 578 aaPredicted RBP7.78□□□□□ -1.16
SF3A3-206ENST00000487062 PORCNQ9H237 461 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 VPS16Q9H269 839 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 EFCC1Q9HA90 598 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 MLXIPQ9HAP2 919 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 SLC5A4Q9NY91 659 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 TAB2Q9NYJ8 693 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 GABBR1Q9UBS5 961 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.78□□□□□ -1.163e-15■□□□□ 9.8
SF3A3-206ENST00000487062 ASTN1O14525 1302 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 ITIH6Q6UXX5 1313 aa7.78□□□□□ -1.16
SF3A3-206ENST00000487062 C2orf72A6NCS6 295 aa7.77□□□□□ -1.17
SF3A3-206ENST00000487062 LGALS16A8MUM7 142 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms