RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 CCDC96Q2M329 555 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 PPP4R3BQ5MIZ7 849 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 FBXO47Q5MNV8 452 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 SYDE2Q5VT97 1194 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 MYSM1Q5VVJ2 828 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 IL31Q6EBC2 164 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 TICAM2Q86XR7 235 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 COLGALT1Q8NBJ5 622 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 NSUN6Q8TEA1 469 aaKnown RBP9.74□□□□□ -0.85
APTX-228ENST00000486724 RILPL2Q969X0 211 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 IWS1Q96ST2 819 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.74□□□□□ -0.85
APTX-228ENST00000486724 SETD4Q9NVD3 440 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 RAB23Q9ULC3 237 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 STX8Q9UNK0 236 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 NRCAMQ92823 1304 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 MIA3Q5JRA6 1907 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 LAMA5O15230 3695 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 EIF3JO75822 258 aaKnown RBP9.73□□□□□ -0.85
APTX-228ENST00000486724 LAG3P18627 525 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 SLC16A2P36021 539 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 ARHGAP4P98171 946 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 MGAT3Q09327 533 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 SMC1AQ14683 1233 aaKnown RBP9.73□□□□□ -0.85
APTX-228ENST00000486724 TAF2Q6P1X5 1199 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 GIMAP6Q6P9H5 292 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 PRR23CQ6ZRP0 262 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 TMC7Q7Z402 723 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 RSPH3Q86UC2 560 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 C12orf76Q8N812 135 aaPredicted RBP9.73□□□□□ -0.85
APTX-228ENST00000486724 RGS22Q8NE09 1264 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 LMBR1Q8WVP7 490 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 BCO2Q9BYV7 579 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 PAG1Q9NWQ8 432 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 LOXHD1Q8IVV2 1947 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 WDR19Q8NEZ3 1342 aa9.73□□□□□ -0.85
APTX-228ENST00000486724 FNDC1Q4ZHG4 1894 aaPredicted RBP9.72□□□□□ -0.85
APTX-228ENST00000486724 IGSF10Q6WRI0 2623 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 HIP1O00291 1037 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 SORBS3O60504 671 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 FOXD2O60548 495 aaPredicted RBP9.72□□□□□ -0.85
APTX-228ENST00000486724 CLASP2O75122 1294 aaKnown RBP9.72□□□□□ -0.85
APTX-228ENST00000486724 GGPS1O95749 300 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 LGALS2P05162 132 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 XRCC6P12956 609 aaKnown RBP eCLIP9.72□□□□□ -0.85
APTX-228ENST00000486724 CHMLP26374 656 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 CD52P31358 61 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 ADAM17P78536 824 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 UBE3CQ15386 1083 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 CELF3Q5SZQ8 465 aaKnown RBP9.72□□□□□ -0.85
APTX-228ENST00000486724 UTP14CQ5TAP6 766 aaKnown RBP9.72□□□□□ -0.85
APTX-228ENST00000486724 LAIR1Q6GTX8 287 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 KCNV1Q6PIU1 500 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 BTNL9Q6UXG8 535 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 RTN4RL1Q86UN2 441 aaPredicted RBP9.72□□□□□ -0.85
APTX-228ENST00000486724 MRPL43Q8N983 215 aaKnown RBP9.72□□□□□ -0.85
APTX-228ENST00000486724 KBTBD3Q8NAB2 608 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 GPR152Q8TDT2 470 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 DCAF4Q8WV16 495 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 NELL1Q92832 810 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 FOXQ1Q9C009 403 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 MAF1Q9H063 256 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 SEMA4GQ9NTN9 838 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 MTMR7Q9Y216 660 aa9.72□□□□□ -0.85
APTX-228ENST00000486724 C2orf71A6NGG8 1288 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 TBKBP1A7MCY6 615 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 LRRN2O75325 713 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 SEC24BO95487 1268 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 RETP07949 1114 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 PPM1AP35813 382 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.86
APTX-228ENST00000486724 TFAP4Q01664 338 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 KRT17Q04695 432 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 CSRP2Q16527 193 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 TTBK2Q6IQ55 1244 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 KANK3Q6NY19 840 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 DCLRE1AQ6PJP8 1040 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 TMC5Q6UXY8 1006 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.71□□□□□ -0.86
APTX-228ENST00000486724 RSAD2Q8WXG1 361 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 TRIM44Q96DX7 344 aaPredicted RBP9.71□□□□□ -0.86
APTX-228ENST00000486724 KIF12Q96FN5 646 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 SHDQ96IW2 340 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 TAAR1Q96RJ0 339 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 RMDN3Q96TC7 470 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 AGO3Q9H9G7 860 aaKnown RBP9.71□□□□□ -0.86
APTX-228ENST00000486724 TYW1Q9NV66 732 aaKnown RBP9.71□□□□□ -0.86
APTX-228ENST00000486724 ANKFY1Q9P2R3 1169 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 HCSTQ9UBK5 93 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 ZNF215Q9UL58 517 aaPredicted RBP9.71□□□□□ -0.86
APTX-228ENST00000486724 PCDHB7Q9Y5E2 793 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 AKAP13Q12802 2813 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 FREM2Q5SZK8 3169 aa9.71□□□□□ -0.86
APTX-228ENST00000486724 GSG1L2A8MUP6 293 aa9.7□□□□□ -0.86
APTX-228ENST00000486724 GDF9O60383 454 aa9.7□□□□□ -0.86
APTX-228ENST00000486724 IBSPP21815 317 aaPredicted RBP9.7□□□□□ -0.86
APTX-228ENST00000486724 MAGEA9P43362 315 aa9.7□□□□□ -0.86
APTX-228ENST00000486724 SARSP49591 514 aaKnown RBP9.7□□□□□ -0.86
APTX-228ENST00000486724 ARHGEF16Q5VV41 709 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms