RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 TDP2O95551 362 aa24.8■■□□□ 1.56
HLA-F-228ENST00000486194 C22orf31O95567 290 aa24.8■■□□□ 1.56
HLA-F-228ENST00000486194 NEK4P51957 841 aa24.8■■□□□ 1.56
HLA-F-228ENST00000486194 KIAA0319LQ8IZA0 1049 aa24.8■■□□□ 1.56
HLA-F-228ENST00000486194 MBOAT7Q96N66 472 aa24.8■■□□□ 1.56
HLA-F-228ENST00000486194 NAP1L4Q99733 375 aaKnown RBP24.8■■□□□ 1.56
HLA-F-228ENST00000486194 DDX25Q9UHL0 483 aaKnown RBP24.8■■□□□ 1.56
HLA-F-228ENST00000486194 PADI3Q9ULW8 664 aa24.8■■□□□ 1.56
HLA-F-228ENST00000486194 EYSQ5T1H1 3165 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 RBAK-RBAKDNI3L0D1 243 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 CHMP2AO43633 222 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 OATP04181 439 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 GCFC2P16383 781 aaKnown RBP24.79■■□□□ 1.56
HLA-F-228ENST00000486194 INF2Q27J81 1249 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 AAK1Q2M2I8 961 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 TRMT1LQ7Z2T5 733 aaKnown RBP24.79■■□□□ 1.56
HLA-F-228ENST00000486194 MIER3Q7Z3K6 550 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 ZNF710Q8N1W2 664 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 METTL13Q8N6R0 699 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 IL27Q8NEV9 243 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 ASB2Q96Q27 587 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 C17orf80Q9BSJ5 609 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 UNC45AQ9H3U1 944 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 BRMS1Q9HCU9 246 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 GINS2Q9Y248 185 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 SIP14410 1827 aa24.79■■□□□ 1.56
HLA-F-228ENST00000486194 UNC80Q8N2C7 3258 aa24.78■■□□□ 1.56
HLA-F-228ENST00000486194 TMOD1P28289 359 aa24.78■■□□□ 1.56
HLA-F-228ENST00000486194 LETM2Q2VYF4 491 aa24.78■■□□□ 1.56
HLA-F-228ENST00000486194 NEK8Q86SG6 692 aa24.78■■□□□ 1.56
HLA-F-228ENST00000486194 FIBCD1Q8N539 461 aa24.78■■□□□ 1.56
HLA-F-228ENST00000486194 GTF3C6Q969F1 213 aa24.78■■□□□ 1.56
HLA-F-228ENST00000486194 RNF216Q9NWF9 866 aaPredicted RBP24.78■■□□□ 1.56
HLA-F-228ENST00000486194 CHD7Q9P2D1 2997 aa24.78■■□□□ 1.56
HLA-F-228ENST00000486194 COG5Q9UP83 839 aa24.78■■□□□ 1.56
HLA-F-228ENST00000486194 RWDD3Q9Y3V2 267 aa24.78■■□□□ 1.56
HLA-F-228ENST00000486194 RPS6KA5O75582 802 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 CTDNEP1O95476 244 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 STAG3L1P0CL83 205 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 PRKCEQ02156 737 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 ME3Q16798 604 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 PTPROQ16827 1216 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 EPC2Q52LR7 807 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 KRT40Q6A162 431 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 PPP4R3AQ6IN85 833 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 ETNPPLQ8TBG4 499 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 MAP7D2Q96T17 732 aa24.77■■□□□ 1.56
HLA-F-228ENST00000486194 GPR182O15218 404 aa24.76■■□□□ 1.55
HLA-F-228ENST00000486194 CRYBB1P53674 252 aaPredicted RBP24.76■■□□□ 1.55
HLA-F-228ENST00000486194 NFX1Q12986 1120 aaKnown RBP24.76■■□□□ 1.55
HLA-F-228ENST00000486194 NPAS4Q8IUM7 802 aa24.76■■□□□ 1.55
HLA-F-228ENST00000486194 TMEM192Q8IY95 271 aa24.76■■□□□ 1.55
HLA-F-228ENST00000486194 NECAB1Q8N987 351 aa24.76■■□□□ 1.55
HLA-F-228ENST00000486194 FAM20AQ96MK3 541 aa24.76■■□□□ 1.55
HLA-F-228ENST00000486194 ADGRA3Q8IWK6 1321 aa24.76■■□□□ 1.55
HLA-F-228ENST00000486194 COL4A4P53420 1690 aaPredicted RBP24.75■■□□□ 1.55
HLA-F-228ENST00000486194 ZNF862O60290 1169 aa24.75■■□□□ 1.55
HLA-F-228ENST00000486194 PIK3AP1Q6ZUJ8 805 aa24.75■■□□□ 1.55
HLA-F-228ENST00000486194 MYH9P35579 1960 aaKnown RBP24.74■■□□□ 1.55
HLA-F-228ENST00000486194 H3BNC9 293 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 DGKIO75912 1065 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 RB1P06400 928 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 KRT2P35908 639 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 BTG3Q14201 252 aaPredicted RBP24.74■■□□□ 1.55
HLA-F-228ENST00000486194 KIZQ2M2Z5 673 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 XKR3Q5GH77 459 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 EFCAB12Q6NXP0 572 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 B3GNT9Q6UX72 402 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 LINC01599Q8WXQ3 324 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 GJA10Q969M2 543 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 ERVK-5Q9HDB9 667 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 AKT3Q9Y243 479 aa24.74■■□□□ 1.55
HLA-F-228ENST00000486194 NOC2LQ9Y3T9 749 aaKnown RBP24.74■■□□□ 1.55
HLA-F-228ENST00000486194 A0A0C4DFX4 3053 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 TBX3O15119 743 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 CCNT1O60563 726 aaKnown RBP24.73■■□□□ 1.55
HLA-F-228ENST00000486194 SEC24BO95487 1268 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 TBC1D8BQ0IIM8 1120 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 GPM6BQ13491 265 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 TRIM29Q14134 588 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 UGCGQ16739 394 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 TMEM266Q2M3C6 531 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 RTN4RL1Q86UN2 441 aaPredicted RBP24.73■■□□□ 1.55
HLA-F-228ENST00000486194 NSUN7Q8NE18 718 aaKnown RBP24.73■■□□□ 1.55
HLA-F-228ENST00000486194 HLA-CQ95604 372 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 ZNF689Q96CS4 500 aaPredicted RBP24.73■■□□□ 1.55
HLA-F-228ENST00000486194 MRPL38Q96DV4 380 aaKnown RBP24.73■■□□□ 1.55
HLA-F-228ENST00000486194 RC3H2Q9HBD1 1191 aaKnown RBP24.73■■□□□ 1.55
HLA-F-228ENST00000486194 KCNMB3Q9NPA1 279 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 C1orf112Q9NSG2 853 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 GJB4Q9NTQ9 266 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 LRFN2Q9ULH4 789 aa24.73■■□□□ 1.55
HLA-F-228ENST00000486194 PRRC2BQ5JSZ5 2229 aaKnown RBP24.73■■□□□ 1.55
HLA-F-228ENST00000486194 DENND3A2RUS2 1198 aa24.72■■□□□ 1.55
HLA-F-228ENST00000486194 SLC37A4O43826 429 aa24.72■■□□□ 1.55
HLA-F-228ENST00000486194 MARCH6O60337 910 aa24.72■■□□□ 1.55
HLA-F-228ENST00000486194 DKC1O60832 514 aaKnown RBP eCLIP24.72■■□□□ 1.55
HLA-F-228ENST00000486194 GPR32O75388 356 aa24.72■■□□□ 1.55
HLA-F-228ENST00000486194 LARGE1O95461 756 aa24.72■■□□□ 1.55
HLA-F-228ENST00000486194 VTNP04004 478 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms