RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 ZKSCAN3Q9BRR0 538 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 MAF1Q9H063 256 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 JMJD4Q9H9V9 463 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 VAT1LQ9HCJ6 419 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 ENTPD7Q9NQZ7 604 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 DUSP12Q9UNI6 340 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 MRPL11Q9Y3B7 192 aaKnown RBP11.32□□□□□ -0.6
SND1-213ENST00000486037 NRCAMQ92823 1304 aa11.32□□□□□ -0.6
SND1-213ENST00000486037 ZZEF1O43149 2961 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 MBLAC1A4D2B0 266 aaPredicted RBP11.31□□□□□ -0.6
SND1-213ENST00000486037 CLASP2O75122 1294 aaKnown RBP11.31□□□□□ -0.6
SND1-213ENST00000486037 REC8O95072 547 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 EOMESO95936 686 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 DCNP07585 359 aaKnown RBP11.31□□□□□ -0.6
SND1-213ENST00000486037 MARK3P27448 753 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 RBM25P49756 843 aaKnown RBP11.31□□□□□ -0.6
SND1-213ENST00000486037 ITIH3Q06033 890 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 GRIK4Q16099 956 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 TPRNQ4KMQ1 711 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 SPECC1Q5M775 1068 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
SND1-213ENST00000486037 PDE12Q6L8Q7 609 aaKnown RBP11.31□□□□□ -0.6
SND1-213ENST00000486037 CES5AQ6NT32 575 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 TAF2Q6P1X5 1199 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 METTL7BQ6UX53 244 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 TICAM2Q86XR7 235 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 RUFY2Q8WXA3 655 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 LSG1Q9H089 658 aaKnown RBP11.31□□□□□ -0.6
SND1-213ENST00000486037 FAM49AQ9H0Q0 323 aaPredicted RBP11.31□□□□□ -0.6
SND1-213ENST00000486037 DLGAP2Q9P1A6 1054 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 TUBE1Q9UJT0 475 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 FBXL21Q9UKT6 434 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 LRFN2Q9ULH4 789 aa11.31□□□□□ -0.6
SND1-213ENST00000486037 FAM208BQ5VWN6 2430 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 FASNP49327 2511 aaKnown RBP11.3□□□□□ -0.6
SND1-213ENST00000486037 C2orf71A6NGG8 1288 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 ADRB1P08588 477 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 FGFR1P11362 822 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 MTHFRP42898 656 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 SARSP49591 514 aaKnown RBP11.3□□□□□ -0.6
SND1-213ENST00000486037 IGBP1P78318 339 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 PLCB3Q01970 1234 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 PPFIA1Q13136 1202 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 TDGQ13569 410 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 KIAA1841Q6NSI8 718 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 LRRC55Q6ZSA7 311 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 ZNF589Q86UQ0 364 aaPredicted RBP11.3□□□□□ -0.6
SND1-213ENST00000486037 MAML2Q8IZL2 1156 aaPredicted RBP11.3□□□□□ -0.6
SND1-213ENST00000486037 FTHL17Q9BXU8 183 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 ANO2Q9NQ90 1003 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 CYP26B1Q9NR63 512 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 DBR1Q9UK59 544 aaKnown RBP11.3□□□□□ -0.6
SND1-213ENST00000486037 ZNF215Q9UL58 517 aaPredicted RBP11.3□□□□□ -0.6
SND1-213ENST00000486037 LZTS1Q9Y250 596 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
SND1-213ENST00000486037 SPATA31C2B4DYI2 1134 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 STK25O00506 426 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 CFHP08603 1231 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 GLULP15104 373 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 EPCAMP16422 314 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 CCND2P30279 289 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 HAND2P61296 217 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 PTH1RQ03431 593 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 PAK2Q13177 524 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 KIAA0319Q5VV43 1072 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 RSPH3Q86UC2 560 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 FCHSD1Q86WN1 690 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 TBC1D10CQ8IV04 446 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 RSAD2Q8WXG1 361 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 KCNK12Q9HB15 430 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 HELLSQ9NRZ9 838 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 RNF19AQ9NV58 838 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 RTEL1Q9NZ71 1219 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 CA14Q9ULX7 337 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 PCDHB7Q9Y5E2 793 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 TRPV2Q9Y5S1 764 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 WDFY3Q8IZQ1 3526 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 COL4A3Q01955 1670 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 IGSF9BQ9UPX0 1349 aa11.29□□□□□ -0.6
SND1-213ENST00000486037 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
SND1-213ENST00000486037 N4BP1O75113 896 aaKnown RBP11.28□□□□□ -0.6
SND1-213ENST00000486037 LRRN2O75325 713 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 FGAP02671 866 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 TCF7P36402 384 aaPredicted RBP11.28□□□□□ -0.6
SND1-213ENST00000486037 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 MCMDC2Q4G0Z9 681 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 TMC5Q6UXY8 1006 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 PNMA1Q8ND90 353 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 TRAPPC12Q8WVT3 735 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 AUTS2Q8WXX7 1259 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 CHAMP1Q96JM3 812 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 TTC14Q96N46 770 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 INPP4AQ96PE3 977 aaPredicted RBP11.28□□□□□ -0.6
SND1-213ENST00000486037 KIF2CQ99661 725 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 TBC1D17Q9HA65 648 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
SND1-213ENST00000486037 NGRNQ9NPE2 291 aaKnown RBP11.28□□□□□ -0.6
SND1-213ENST00000486037 USTQ9Y2C2 406 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms