RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 TBX3O15119 743 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 PSAPP07602 524 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 INSRRP14616 1297 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 CSF2RAP15509 400 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 RAG1P15918 1043 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 SYT1P21579 422 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 JAK3P52333 1124 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 IGBP1P78318 339 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 RESTQ13127 1097 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 PPFIA1Q13136 1202 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 GPNMBQ14956 572 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 GRIK4Q16099 956 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 PDXDC2PQ6P474 469 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 TRMT1LQ7Z2T5 733 aaKnown RBP11.92□□□□□ -0.5
SSBP1-210ENST00000481508 FERMT3Q86UX7 667 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 SERINC5Q86VE9 423 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 NAP1L4Q99733 375 aaKnown RBP11.92□□□□□ -0.5
SSBP1-210ENST00000481508 LBHD1Q9BQE6 289 aaPredicted RBP11.92□□□□□ -0.5
SSBP1-210ENST00000481508 SEZ6LQ9BYH1 1024 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 AZI2Q9H6S1 392 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 PRKAG2Q9UGJ0 569 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 MTMR6Q9Y217 621 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 SAMM50Q9Y512 469 aa11.92□□□□□ -0.5
SSBP1-210ENST00000481508 MAFBQ9Y5Q3 323 aaPredicted RBP11.92□□□□□ -0.5
SSBP1-210ENST00000481508 POTEB3A0JP26 581 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 TXKP42681 527 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 GRIN2CQ14957 1233 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 IL17AQ16552 155 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 TCTN1Q2MV58 587 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 FAM160B1Q5W0V3 765 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 NCAPH2Q6IBW4 605 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 FAM173BQ6P4H8 233 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 POTEBQ6S5H4 581 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 C16orf59Q7L2K0 433 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 BANK1Q8NDB2 785 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 ATP8B4Q8TF62 1192 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 ATP6V0A1Q93050 837 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 SNX27Q96L92 541 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 UHRF1Q96T88 793 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-210ENST00000481508 FTOQ9C0B1 505 aaKnown RBP eCLIP11.91□□□□□ -0.5
SSBP1-210ENST00000481508 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
SSBP1-210ENST00000481508 NOD1Q9Y239 953 aa11.91□□□□□ -0.5
SSBP1-210ENST00000481508 NRCAMQ92823 1304 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 MBLAC1A4D2B0 266 aaPredicted RBP11.9□□□□□ -0.5
SSBP1-210ENST00000481508 OR52Z1P0C646 297 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 ACRP10323 421 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 CKBP12277 381 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 SFNP31947 248 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 PRKCEQ02156 737 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 FPGSQ05932 587 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 RBL2Q08999 1139 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 PTK7Q13308 1070 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 PKP1Q13835 747 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 MBTPS1Q14703 1052 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 ZNF618Q5T7W0 954 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 MFSD5Q6N075 450 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 MICAL3Q7RTP6 2002 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 DYDC2Q96IM9 177 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 SH2D3AQ9BRG2 576 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 TTC12Q9H892 705 aaPredicted RBP11.9□□□□□ -0.5
SSBP1-210ENST00000481508 BRWD1Q9NSI6 2320 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 RGL1Q9NZL6 768 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 TCEAL9Q9UHQ7 104 aa11.9□□□□□ -0.5
SSBP1-210ENST00000481508 NOL7Q9UMY1 257 aaKnown RBP11.9□□□□□ -0.5
SSBP1-210ENST00000481508 A0A087WWV3 80 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 ZBTB39O15060 712 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 SNPHO15079 494 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 MARCH6O60337 910 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 OATP04181 439 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 IQCF3P0C7M6 154 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 CYP4A11Q02928 519 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 PTGDRQ13258 359 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 CTTNQ14247 550 aaKnown RBP11.89□□□□□ -0.51
SSBP1-210ENST00000481508 PLA2G4FQ68DD2 849 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 MTHFD1LQ6UB35 978 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 LRRC8DQ7L1W4 858 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 CKAP2LQ8IYA6 745 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 SLFN12Q8IYM2 578 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 CEP89Q96ST8 783 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 TUBE1Q9UJT0 475 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 TRANK1O15050 2925 aa11.89□□□□□ -0.51
SSBP1-210ENST00000481508 TCHHQ07283 1943 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 STX6O43752 255 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 HBP1O60381 514 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 NBNO60934 754 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 BAG4O95429 457 aaKnown RBP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 C22orf31O95567 290 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 CTSHP09668 335 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 SELPP16109 830 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 KLRC1P26715 233 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 THPOP40225 353 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 TECP42680 631 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 SLC26A2P50443 739 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 SMAD3P84022 425 aaKnown RBP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 MGAT3Q09327 533 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 ORC2Q13416 577 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-210ENST00000481508 EPHA7Q15375 998 aa11.88□□□□□ -0.51
SSBP1-210ENST00000481508 TARBP2Q15633 366 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms